Annotation Detail for NAPG

View Evidences	View Variants	View Annotations

Basic Information Top

Gene Symbol:	NAPG ( GAMMASNAP )
Gene Full Name:	N-ethylmaleimide-sensitive factor attachment protein, gamma
Band:	18p11.22
Quick Links	Entrez ID:8774; OMIM: 603216; Uniprot ID:SNAG_HUMAN; ENSEMBL ID: ENSG00000134265; HGNC ID: 7642
Relate to Another Database:	SFARIGene; denovo-db

Post Translation Modification

Location(AA)	Modification
284	Phosphoserine (By similarity).
307	Phosphotyrosine.

Location(AA)	Modifications	Resource
284	Phosphoserine (By similarity).	Swiss-Prot 53.0
307	Phosphotyrosine.	Swiss-Prot 53.0
307	Phosphotyrosine	Phospho.ELM 6.0

Validated transcription factor binding site by ChIP-Chip and ChIP-Seq

Transcrip Factors	Experimental Cell	Database	TF Binding Start	TF Binding End	TF Binding Length	The Distance to Gene
CTCF	CD4	GSE12889	10510200	10510394	194	5734
CTCF	CD4	SISSRdata	10510200	10510394	194	5734
CTCF	G2	GSE9613	10509968	10510417	449	5838
CTCF	G2	GSE9613	10515883	10516022	139	78
P300	T30-glioblastoma	GSE21026	10515729	10516329	600	2
RNAII	Tamoxifen-MCF7	GSE14664	10508455	10508529	74	7539
hScc1	Bcell	GSE12603	10509933	10510892	959	5618
hScc1	CdLS	GSE12603	10509933	10510591	658	5769
hScc1	G2	GSE9613	10509898	10510858	960	5653

Transcrip Factors	Experimental Cell	Database	TF Binding Start	TF Binding End	TF Binding Length	The Distance to Gene
CTCF	CD4	GSE12889	10550499	10550835	336	10297
CTCF	CD4	SISSRdata	10550499	10550835	336	10297
CTCF	G2	GSE9613	10549909	10551007	1098	10088
hScc1	Bcell	GSE12603	10548665	10548941	276	8433
hScc1	Bcell	GSE12603	10550270	10551007	737	10268
hScc1	CdLS	GSE12603	10550234	10550932	698	10213

Transcrip Factors	Experimental Cell	Database	TF Binding Start	TF Binding End	TF Binding Length
ER	E2-MCF7	GSE14664	10526142	10526183	41
ETS1	Jurkat	GSE17954	10515602	10516836	1234
H3K4me3	colorectal	cancer	10517403	10517860	457
H3ac	HepG2	E	10516664	10516877	213
H3ac	HepG2	E	10517403	10517860	457
H3ac	HepG2	E	10518224	10519097	873
Oct1	H2O2-Hela	GSE14283	10525171	10525200	29
Oct1	Hela	GSE14283	10525116	10525205	89
Oct1	Hela	GSE14283	10526140	10526184	44
hScc1	Bcell	GSE12603	10515809	10516337	528

Validated miRNA targets

Micro RNA Name	Stem Loop Name	The chromosome that miRNA located	Publication
hsa-let-7b	hsa-let-7b	22	18668040
hsa-let-7b*	hsa-let-7b	22	18668040
hsa-miR-1	hsa-mir-1-2	18	18668040
hsa-miR-1	hsa-mir-1-1	20	18668040
hsa-miR-155	hsa-mir-155	21	18668040
hsa-miR-155*	hsa-mir-155	21	18668040
hsa-miR-16	hsa-mir-16-1	13	18668040
hsa-miR-16	hsa-mir-16-2	3	18668040
hsa-miR-30a	hsa-mir-30a	6	18668040
hsa-miR-30a*	hsa-mir-30a	6	18668040
hsa-miR-30b	hsa-mir-30b	8	18668040
hsa-miR-30b*	hsa-mir-30b	8	18668040
hsa-miR-30c	hsa-mir-30c-2	6	18668040
hsa-miR-30c	hsa-mir-30c-1	1	18668040
hsa-miR-30c-1*	hsa-mir-30c-1	1	18668040
hsa-miR-30c-2*	hsa-mir-30c-2	6	18668040
hsa-miR-30d	hsa-mir-30d	8	18668040
hsa-miR-30d*	hsa-mir-30d	8	18668040
hsa-miR-30e	hsa-mir-30e	1	18668040
hsa-miR-30e*	hsa-mir-30e	1	18668040

ID in Tarbase	Data Type	Support Type	miRNA	Gene	Direct Support	Publication
1071	Unknown	pSILAC	miR-16	NAPG	down 50-25%	18668040
1251	Unknown	pSILAC	miR-30	NAPG	down 50-25%	18668040
Ensembl	Protein Type	Differentially expressed in	Pathology or Event	Mis Regulation	Gene Expression	Tumour Involvement
ENSG00000134265		n_a	n_a	n_a	"lymphocyte, muscle cell"	"malignant tumour, carcinoma, leukaemia"
ENSG00000134265		n_a	n_a	n_a	"lymphocyte, muscle cell"	"malignant tumour, carcinoma, leukaemia"

Cis-Nats regulation

Simple Query:

Paper Collected: 6/30/2018

Last Update: 8/26/2018