Annotation Detail for MATN4
Basic Information Top
| Gene Symbol: | MATN4 ( FLJ14417,HE6WCR54 ) |
|---|---|
| Gene Full Name: | matrilin 4 |
| Band: | 20q13.12 |
| Quick Links | Entrez ID:8785; OMIM: 603897; Uniprot ID:MATN4_HUMAN; ENSEMBL ID: ENSG00000124159; HGNC ID: 6910 |
| Relate to Another Database: | SFARIGene; denovo-db |
| Location(AA) | Modification | |
|---|---|---|
| 69 | N-linked (GlcNAc...) (Potential). | |
| 251 | N-linked (GlcNAc...) (Potential). | |
| 305 | N-linked (GlcNAc...) (Potential). | |
| Location(AA) | Modifications | Resource |
|---|---|---|
| 69 | N-linked (GlcNAc...) (Potential). | Swiss-Prot 53.0 |
| 251 | N-linked (GlcNAc...) (Potential). | Swiss-Prot 53.0 |
| 305 | N-linked (GlcNAc...) (Potential). | Swiss-Prot 53.0 |
| Location(AA) | Modification | Resource |
|---|---|---|
| 69 | N-linked | HMM predict |
| 80 | Phosphoserine(ATM) | HMM predict |
| 186 | Phosphoserine(MAPK) | HMM predict |
| 305 | N-linked | HMM predict |
| 445 | Phosphothreonine(PKC) | HMM predict |
| 478 | Phosphoserine(CK1) | HMM predict |
| 502 | Phosphoserine(CK2) | HMM predict |
| 502 | Phosphoserine(ATM) | HMM predict |
- RefSeq ID: NM_003833
- Location:chr20 43355500-43367644
- strand:-
| No data |
| Transcrip Factors | Experimental Cell | Database | TF Binding Start | TF Binding End | TF Binding Length | The Distance to Gene |
|---|---|---|---|---|---|---|
| CTCF | G2 | GSE9613 | 43352738 | 43353515 | 777 | 2374 |
| hScc1 | Bcell | GSE12603 | 43352846 | 43353442 | 596 | 2357 |
| hScc1 | G2 | GSE9613 | 43352113 | 43353688 | 1575 | 2600 |
| Transcrip Factors | Experimental Cell | Database | TF Binding Start | TF Binding End | TF Binding Length | The Distance to Gene |
|---|---|---|---|---|---|---|
| CTCF | CD4 | GSE12889 | 43355875 | 43356213 | 338 | 0 |
| CTCF | CD4 | GSE12889 | 43363098 | 43363286 | 188 | 0 |
| CTCF | CD4 | SISSRdata | 43355875 | 43356213 | 338 | 0 |
| CTCF | CD4 | SISSRdata | 43363098 | 43363286 | 188 | 0 |
| CTCF | Jurkat | GSE12889 | 43355876 | 43356065 | 189 | 0 |
| CTCF | Jurkat | GSE12889 | 43363051 | 43363376 | 325 | 0 |
| CTCF | G2 | GSE9613 | 43355361 | 43356123 | 762 | 0 |
| Myc | hES | GSE17917 | 43355555 | 43355929 | 374 | 0 |
| Rb | Growing | GSE19898 | 43355862 | 43356133 | 271 | 0 |
| Rb | shRbSenescence | GSE19898 | 43355802 | 43356053 | 251 | 0 |
| hScc1 | Bcell | GSE12603 | 43355469 | 43356123 | 654 | 0 |
Validated miRNA targets| Cluster ID | Plue Type | Plus Gene Name | Plus Chromosome | Plus Start | Plus End | Overlap Length | Minus Type | Minus Gene Name | Minus Chromosome | Minus Star | Minus End | Type |
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 16421 | mRNA | RBPSUHL | chr20 | 43368904 | 43379876 | 77 | mRNA | MATN4 | chr20 | 43355504 | 43370353 | Sense/Antisense (SA) pairs |