AutismKB 2.0

Annotation Detail for TNFRSF10C


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Basic Information Top
Gene Symbol:TNFRSF10C ( CD263,DCR1,DCR1-TNFR,LIT,MGC149501,MGC149502,TRAIL-R3,TRAILR3,TRID )
Gene Full Name: tumor necrosis factor receptor superfamily, member 10c, decoy without an intracellular domain
Band: 8p21.3
Quick LinksEntrez ID:8794; OMIM: 603613; Uniprot ID:TR10C_HUMAN; ENSEMBL ID: ENSG00000173535; HGNC ID: 11906
Relate to Another Database: SFARIGene; denovo-db
Post Translation Modification Top
Location(AA) Modification
77N-linked (GlcNAc...) (high mannose)
140N-linked (GlcNAc...) (high mannose)
156N-linked (GlcNAc...) (high mannose)
Location(AA) Modifications Resource
77N-linked (GlcNAc...) (high mannose)(Potential).Swiss-Prot 53.0
140N-linked (GlcNAc...) (high mannose)(Potential).Swiss-Prot 53.0
156N-linked (GlcNAc...) (high mannose)(Potential).Swiss-Prot 53.0
236GPI-anchor amidated alanine (Potential).Swiss-Prot 53.0
Location(AA) Modification Resource
38O-linkedHMM predict
75Phosphotyrosine(INSR)HMM predict
133Phosphoserine(CK1)HMM predict
139Phosphoserine(IKK)HMM predict
140N-linkedHMM predict
156N-linkedHMM predict
161Phosphothreonine(MAPK)HMM predict
171O-linkedHMM predict
174O-linkedHMM predict
186O-linkedHMM predict
189O-linkedHMM predict
197O-linkedHMM predict
201Phosphoserine(CDC2)HMM predict
201O-linkedHMM predict
204O-linkedHMM predict
212O-linkedHMM predict
216O-linkedHMM predict
216Phosphoserine(CDC2)HMM predict
219O-linkedHMM predict
227O-linkedHMM predict
231O-linkedHMM predict
231Phosphoserine(CDC2)HMM predict
234Phosphothreonine(MAPK)HMM predict
234Phosphothreonine(CDK)HMM predict
234O-linkedHMM predict
238O-linkedHMM predict
Validated transcription factor binding site by ChIP-Chip and ChIP-Seq
  • RefSeq ID: NM_003841
  • Location:chr8 23016378-23030892
  • strand:+
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
CTCF G2GSE9613 23009632 23010073 441 6526
CTCF G2GSE9613 23015962 23016243 281 276
P300 T30-glioblastomaGSE21026 23005446 23006397 951 10457
TFAP2C MCF7GSE21234 23016048 23016531 483 89
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
CTCF G2GSE9613 23030997 23031716 719 464
ER Breast-CancerGSE22609 23033050 23033639 589 2452
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
FOXA1 MCF7GSE15244 23019003 23019846 843 0
NRSF pAbJurkat 23025013 23025273 260 0
RARG MCF7GSE15244 23018681 23019846 1165 0
hScc1 BcellGSE12603 23018894 23019145 251 0
hScc1 CdLSGSE12603 23016389 23017119 730 0
Validated miRNA targets Top
Cis-Nats regulation Top

Simple Query:


  (e.g. CHD8)

Syndromic Genes

Non-syndromic Genes

AutismKB Statistics

  • Studies: 1,036
  • Genes: 1,379
  • CNVs/SVs: 5,420
  • SNVs/Indels: 11,669
  • de novo Mutations: 5,669
  • Mosaics: 789
  • Linkage Regions: 172
  • Paper Collected: 6/30/2018
  • Last Update: 8/26/2018


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