Annotation Detail for PEX11B
Basic Information Top
| Gene Symbol: | PEX11B ( PEX11-BETA ) |
|---|---|
| Gene Full Name: | peroxisomal biogenesis factor 11 beta |
| Band: | 1q21.1 |
| Quick Links | Entrez ID:8799; OMIM: 603867; Uniprot ID:PX11B_HUMAN; ENSEMBL ID: ENSG00000131779; HGNC ID: 8853 |
| Relate to Another Database: | SFARIGene; denovo-db |
| Location(AA) | Modification | |
|---|---|---|
| 43 | N6-acetyllysine. | |
| Location(AA) | Modifications | Resource |
|---|
| Location(AA) | Modification | Resource |
|---|---|---|
| 178 | Phosphothreonine(CDC2) | HMM predict |
- RefSeq ID: NM_003846
- Location:chr1 144227739-144235087
- strand:+
| Transcrip Factors | Experimental Cell | Database | TF Binding Start | TF Binding End | TF Binding Length | The Distance to Gene |
|---|---|---|---|---|---|---|
| CTCF | G2 | GSE9613 | 144226771 | 144226957 | 186 | 876 |
| ETS1 | Jurkat | GSE17954 | 144226744 | 144228104 | 1360 | 316 |
| H3K4me3 | colorectal | cancer | 144226428 | 144226957 | 529 | 1047 |
| H3ac | HepG2 | E | 144226428 | 144227340 | 912 | 856 |
| P300 | T30-glioblastoma | GSE21026 | 144226498 | 144228381 | 1883 | 300 |
| Rb | Senescent | GSE19898 | 144226768 | 144227021 | 253 | 845 |
| p130 | Senescent | GSE19898 | 144226730 | 144226982 | 252 | 884 |
| No data |
| Transcrip Factors | Experimental Cell | Database | TF Binding Start | TF Binding End | TF Binding Length | The Distance to Gene |
|---|---|---|---|---|---|---|
| CTCF | G2 | GSE9613 | 144227875 | 144228177 | 302 | 0 |
| H3ac | HepG2 | E | 144227942 | 144228405 | 463 | 0 |
| Micro RNA Name | Stem Loop Name | The chromosome that miRNA located | Publication |
|---|---|---|---|
| hsa-let-7b | hsa-let-7b | 22 | 18668040 |
| hsa-let-7b* | hsa-let-7b | 22 | 18668040 |
| hsa-miR-1 | hsa-mir-1-2 | 18 | 18668040 |
| hsa-miR-1 | hsa-mir-1-1 | 20 | 18668040 |
| hsa-miR-155 | hsa-mir-155 | 21 | 18668040 |
| hsa-miR-155* | hsa-mir-155 | 21 | 18668040 |
| hsa-miR-16 | hsa-mir-16-1 | 13 | 18668040 |
| hsa-miR-16 | hsa-mir-16-2 | 3 | 18668040 |
| hsa-miR-30a | hsa-mir-30a | 6 | 18668040 |
| hsa-miR-30a* | hsa-mir-30a | 6 | 18668040 |
| hsa-miR-30b | hsa-mir-30b | 8 | 18668040 |
| hsa-miR-30b* | hsa-mir-30b | 8 | 18668040 |
| hsa-miR-30c | hsa-mir-30c-2 | 6 | 18668040 |
| hsa-miR-30c | hsa-mir-30c-1 | 1 | 18668040 |
| hsa-miR-30c-1* | hsa-mir-30c-1 | 1 | 18668040 |
| hsa-miR-30c-2* | hsa-mir-30c-2 | 6 | 18668040 |
| hsa-miR-30d | hsa-mir-30d | 8 | 18668040 |
| hsa-miR-30d* | hsa-mir-30d | 8 | 18668040 |
| hsa-miR-30e | hsa-mir-30e | 1 | 18668040 |
| hsa-miR-30e* | hsa-mir-30e | 1 | 18668040 |
| ID in Tarbase | Data Type | Support Type | miRNA | Gene | Direct Support | Publication |
|---|---|---|---|---|---|---|
| 1261 | Unknown | pSILAC | miR-30 | PEX11B | down 50-25% | 18668040 |
| Ensembl | Protein Type | Differentially expressed in | Pathology or Event | Mis Regulation | Gene Expression | Tumour Involvement |
| ENSG00000131779 | n_a | n_a | n_a | n_a | n_a |
Cis-Nats regulation