Annotation Detail for SOCS2
Basic Information Top
| Gene Symbol: | SOCS2 ( CIS2,Cish2,SOCS-2,SSI-2,SSI2,STATI2 ) |
|---|---|
| Gene Full Name: | suppressor of cytokine signaling 2 |
| Band: | 12q |
| Quick Links | Entrez ID:8835; OMIM: 605117; Uniprot ID:SOCS2_HUMAN; ENSEMBL ID: ENSG00000120833; HGNC ID: 19382 |
| Relate to Another Database: | SFARIGene; denovo-db |
| No data |
| No data |
| Location(AA) | Modification | Resource |
|---|---|---|
| 78 | Phosphoserine(CK1) | HMM predict |
| 145 | N-linked | HMM predict |
| 190 | Phosphotyrosine(INSR) | HMM predict |
- RefSeq ID: NM_003877
- Location:chr12 92487728-92494108
- strand:+
| Transcrip Factors | Experimental Cell | Database | TF Binding Start | TF Binding End | TF Binding Length | The Distance to Gene |
|---|---|---|---|---|---|---|
| CTCF | G2 | GSE9613 | 92468814 | 92469463 | 649 | 18590 |
| FOXA1 | DLD1 | GSE12801 | 92481388 | 92482460 | 1072 | 5805 |
| FOXA1 | MCF7 | GSE15244 | 92481678 | 92482386 | 708 | 5697 |
| FoxA1 | MCF7 | MACSdata | 92481642 | 92482069 | 427 | 5873 |
| RARA | MCF7 | GSE15244 | 92481641 | 92482315 | 674 | 5751 |
| Rb | Growing | GSE19898 | 92484806 | 92484951 | 145 | 2850 |
| USF1 | HepG2 | E | 92481562 | 92482315 | 753 | 5790 |
| hScc1 | G2 | GSE9613 | 92468769 | 92469463 | 694 | 18613 |
| Transcrip Factors | Experimental Cell | Database | TF Binding Start | TF Binding End | TF Binding Length | The Distance to Gene |
|---|---|---|---|---|---|---|
| CTCF | G2 | GSE9613 | 92509342 | 92509721 | 379 | 15423 |
| Transcrip Factors | Experimental Cell | Database | TF Binding Start | TF Binding End | TF Binding Length | The Distance to Gene |
|---|---|---|---|---|---|---|
| CTCF | G2 | GSE9613 | 92487292 | 92488573 | 1281 | 0 |
| CTCF | G2 | GSE9613 | 92488825 | 92490065 | 1240 | 0 |
| Gata2 | K562 | GSE18868 | 92489902 | 92491110 | 1208 | 0 |
| H3K4me3 | colorectal | cancer | 92491289 | 92491665 | 376 | 0 |
| hScc1 | Bcell | GSE12603 | 92487256 | 92490109 | 2853 | 0 |
| hScc1 | CdLS | GSE12603 | 92487189 | 92490311 | 3122 | 0 |
| hScc1 | G2 | GSE9613 | 92487292 | 92490005 | 2713 | 0 |
| p130 | Senescent | GSE19898 | 92488665 | 92489092 | 427 | 0 |
Validated miRNA targets| Cluster ID | Plue Type | Plus Gene Name | Plus Chromosome | Plus Start | Plus End | Overlap Length | Minus Type | Minus Gene Name | Minus Chromosome | Minus Star | Minus End | Type |
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 6431 | mRNA | SOCS2 | chr12 | 92467948 | 92472446 | 64 | mRNA | LOC144481 | chr12 | 92438707 | 92468012 | Sense/Antisense (SA) pairs |