Annotation Detail for SPHK1
Basic Information Top
| Gene Symbol: | SPHK1 ( SPHK ) |
|---|---|
| Gene Full Name: | sphingosine kinase 1 |
| Band: | 17q25.2 |
| Quick Links | Entrez ID:8877; OMIM: 603730; Uniprot ID:SPHK1_HUMAN; ENSEMBL ID: ENSG00000176170; HGNC ID: 11240 |
| Relate to Another Database: | SFARIGene; denovo-db |
| Location(AA) | Modification | |
|---|---|---|
| 155 | Nuclear export signal 1. | |
| 169 | Nuclear export signal 2. | |
| 193 | Phosphothreonine. | |
| 225 | Phosphoserine. | |
| Location(AA) | Modifications | Resource |
|---|
| Location(AA) | Modification | Resource |
|---|---|---|
| 8 | Methylarginine | HMM predict |
| 137 | N-linked | HMM predict |
| 165 | Phosphoserine(CAMK2) | HMM predict |
| 220 | O-linked | HMM predict |
| 222 | Phosphothreonine(MAPK) | HMM predict |
| 225 | O-linked | HMM predict |
| 225 | Phosphoserine(MAPK) | HMM predict |
| 225 | Phosphoserine(CDC2) | HMM predict |
| 318 | Phosphotyrosine(Syk) | HMM predict |
| 371 | Serine | HMM predict |
| 374 | Proline | HMM predict |
- RefSeq ID: NM_021972
- Location:chr17 71892296-71895535
- strand:+
| Transcrip Factors | Experimental Cell | Database | TF Binding Start | TF Binding End | TF Binding Length | The Distance to Gene |
|---|---|---|---|---|---|---|
| CTCF | G2 | GSE9613 | 71877800 | 71878338 | 538 | 14228 |
| CTCF | G2 | GSE9613 | 71887280 | 71887418 | 138 | 4948 |
| CTCF | G2 | GSE9613 | 71889014 | 71889149 | 135 | 3215 |
| CTCF | G2 | GSE9613 | 71891517 | 71892432 | 915 | 322 |
| H3ac | HepG2 | E | 71887280 | 71887702 | 422 | 4806 |
| H3ac | HepG2 | E | 71889485 | 71890131 | 646 | 2489 |
| Oct1 | H2O2-Hela | GSE14283 | 71879089 | 71879128 | 39 | 13188 |
| Oct1 | Hela | GSE14283 | 71879080 | 71879127 | 47 | 13193 |
| P300 | T30-glioblastoma | GSE21026 | 71877848 | 71879245 | 1397 | 13750 |
| RARA | MCF7 | GSE15244 | 71877800 | 71878264 | 464 | 14265 |
| RARG | MCF7 | GSE15244 | 71877800 | 71878119 | 319 | 14337 |
| Rb | Growing | GSE19898 | 71878339 | 71878538 | 199 | 13858 |
| Rb | Senescent | GSE19898 | 71878404 | 71878654 | 250 | 13768 |
| hScc1 | Bcell | GSE12603 | 71890494 | 71890860 | 366 | 1620 |
| No data |
| No data |
Validated miRNA targets| Cluster ID | Plue Type | Plus Gene Name | Plus Chromosome | Plus Start | Plus End | Overlap Length | Minus Type | Minus Gene Name | Minus Chromosome | Minus Star | Minus End | Type |
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 11674 | mRNA | SPHK1 | chr17 | 71884336 | 71895536 | 7824 | EST | chr17 | 71839962 | 71892160 | Non-exonic Bidirectional (NOB) pairs | |