Annotation Detail for TRIM4
Basic Information Top
| Gene Symbol: | TRIM4 ( RNF87 ) |
|---|---|
| Gene Full Name: | tripartite motif-containing 4 |
| Band: | 7q22.1 |
| Quick Links | Entrez ID:89122; OMIM: NA; Uniprot ID:TRIM4_HUMAN; ENSEMBL ID: ENSG00000146833; HGNC ID: 16275 |
| Relate to Another Database: | SFARIGene; denovo-db |
| No data |
| No data |
| Location(AA) | Modification | Resource |
|---|---|---|
| 184 | N-linked | HMM predict |
| 200 | Phosphoserine(PKG) | HMM predict |
| 240 | N-linked | HMM predict |
| 257 | Phosphoserine | HMM predict |
| 389 | Phosphoserine(CK1) | HMM predict |
| 460 | Phosphotyrosine(Jak) | HMM predict |
- RefSeq ID: NM_033017
- Location:chr7 99325972-99355089
- strand:-
| Transcrip Factors | Experimental Cell | Database | TF Binding Start | TF Binding End | TF Binding Length | The Distance to Gene |
|---|---|---|---|---|---|---|
| ETS1 | Jurkat | GSE17954 | 99354406 | 99355825 | 1419 | 26 |
| GABP | k562 | GSE8489 | 99355142 | 99355720 | 578 | 342 |
| GABP | k562 | GSE8489 | 99356186 | 99356653 | 467 | 1330 |
| H3ac | HepG2 | E | 99355342 | 99355720 | 378 | 442 |
| p130 | Senescent | GSE19898 | 99355112 | 99355789 | 677 | 361 |
| p130 | shRbQuiescent | GSE19898 | 99354933 | 99355786 | 853 | 270 |
| No data |
| Transcrip Factors | Experimental Cell | Database | TF Binding Start | TF Binding End | TF Binding Length | The Distance to Gene |
|---|---|---|---|---|---|---|
| CTCF | CD4 | GSE12889 | 99348746 | 99348966 | 220 | 0 |
| CTCF | CD4 | SISSRdata | 99348746 | 99348966 | 220 | 0 |
| CTCF | G2 | GSE9613 | 99328262 | 99328500 | 238 | 0 |
| CTCF | G2 | GSE9613 | 99348705 | 99348920 | 215 | 0 |
| CTCF | G2 | GSE9613 | 99354646 | 99355306 | 660 | 0 |
| ER | Fulvestrant-MCF7 | GSE14664 | 99347903 | 99347942 | 39 | 0 |
| GABP | k562 | GSE8489 | 99353311 | 99353682 | 371 | 0 |
| H3K4me2 | HCT116 | GSE10453 | 99353458 | 99353682 | 224 | 0 |
| H3K4me3 | colorectal | cancer | 99353347 | 99353682 | 335 | 0 |
| Oct1 | H2O2-Hela | GSE14283 | 99342640 | 99342708 | 68 | 0 |
| TAF | Hela | GSE8489 | 99327989 | 99328500 | 511 | 0 |
| TAF | Hela | GSE8489 | 99351972 | 99352729 | 757 | 0 |
| hScc1 | Bcell | GSE12603 | 99348668 | 99348920 | 252 | 0 |
| hScc1 | CdLS | GSE12603 | 99348577 | 99348920 | 343 | 0 |
| hScc1 | CdLS | GSE12603 | 99354536 | 99355342 | 806 | 0 |
| hScc1 | G2 | GSE9613 | 99348705 | 99348920 | 215 | 0 |
Validated miRNA targets