Annotation Detail for TOP3B
Basic Information Top
| Gene Symbol: | TOP3B ( FLJ39376 ) |
|---|---|
| Gene Full Name: | topoisomerase (DNA) III beta |
| Band: | 22q11.22 |
| Quick Links | Entrez ID:8940; OMIM: 603582; Uniprot ID:TOP3B_HUMAN; ENSEMBL ID: ENSG00000100038; HGNC ID: 11993 |
| Relate to Another Database: | SFARIGene; denovo-db |
| No data |
| No data |
| Location(AA) | Modification | Resource |
|---|---|---|
| 25 | Phosphoserine(CK1) | HMM predict |
| 55 | Phosphothreonine(PKA) | HMM predict |
| 63 | Phosphothreonine(PKC) | HMM predict |
| 83 | Phosphoserine(ATM) | HMM predict |
| 87 | Phosphothreonine(PKC) | HMM predict |
| 154 | Phosphoserine(PKB) | HMM predict |
| 154 | Phosphoserine(IKK) | HMM predict |
| 275 | N-linked | HMM predict |
| 312 | Phosphoserine(CDC2) | HMM predict |
| 449 | Phosphoserine(CDC2) | HMM predict |
| 493 | Phosphotyrosine(INSR) | HMM predict |
| 578 | Phosphotyrosine(EGFR) | HMM predict |
| 612 | Phosphoserine(CDC2) | HMM predict |
| 655 | N-linked | HMM predict |
| 684 | Phosphoserine(PKB) | HMM predict |
| 684 | Phosphoserine(PKA) | HMM predict |
| 767 | Phosphoserine(PKG) | HMM predict |
| 788 | Phosphoserine | HMM predict |
| 788 | Phosphoserine(CDK) | HMM predict |
| 788 | Phosphoserine(CDC2) | HMM predict |
| 837 | Methylarginine | HMM predict |
- RefSeq ID: NM_003935
- Location:chr22 20641403-20667146
- strand:-
| Transcrip Factors | Experimental Cell | Database | TF Binding Start | TF Binding End | TF Binding Length | The Distance to Gene |
|---|---|---|---|---|---|---|
| GABP | k562 | GSE8489 | 20668734 | 20669813 | 1079 | 2127 |
| Nanog | ES | GSE20650 | 20667008 | 20667352 | 344 | 34 |
| Oct4 | hES | GSE17917 | 20667142 | 20667366 | 224 | 108 |
| P300 | T0-glioblastoma | GSE21026 | 20667003 | 20667374 | 371 | 42 |
| P300 | T30-glioblastoma | GSE21026 | 20666880 | 20667568 | 688 | 78 |
| PHF8 | 293T | GSE20725 | 20666627 | 20667715 | 1088 | 25 |
| PHF8 | HeLa | GSE20725 | 20666692 | 20667760 | 1068 | 80 |
| Rb | Growing | GSE19898 | 20667153 | 20667357 | 204 | 109 |
| Rb | Quiescent | GSE19898 | 20667148 | 20667294 | 146 | 75 |
| VDR | GM10861-Unstim | GSE22484 | 20666643 | 20667670 | 1027 | 10 |
| VDR | GM10861-stim | GSE22484 | 20666769 | 20667686 | 917 | 81 |
| p130 | Senescent | GSE19898 | 20667124 | 20667405 | 281 | 118 |
| No data |
| Transcrip Factors | Experimental Cell | Database | TF Binding Start | TF Binding End | TF Binding Length | The Distance to Gene |
|---|---|---|---|---|---|---|
| CTCF | CD4 | GSE12889 | 20656735 | 20657012 | 277 | 0 |
| CTCF | CD4 | SISSRdata | 20656735 | 20657012 | 277 | 0 |
| CTCF | Jurkat | GSE12889 | 20656563 | 20656966 | 403 | 0 |
| CTCF | G2 | GSE9613 | 20647998 | 20648373 | 375 | 0 |
| CTCF | G2 | GSE9613 | 20653243 | 20653463 | 220 | 0 |
| ETS1 | Jurkat | GSE17954 | 20666585 | 20667549 | 964 | 0 |
| GABP | k562 | GSE8489 | 20664373 | 20665920 | 1547 | 0 |
| GABP | k562 | GSE8489 | 20666305 | 20667545 | 1240 | 0 |
| H3K4me3 | colorectal | cancer | 20666305 | 20666734 | 429 | 0 |
| H3ac | HepG2 | E | 20666305 | 20666941 | 636 | 0 |
| PHF8 | Hs68plusFBS | GSE20725 | 20666559 | 20667472 | 913 | 0 |
| TFAP2C | MCF7 | GSE21234 | 20643747 | 20644551 | 804 | 0 |
| VDR | GM10855-Unstim | GSE22484 | 20666626 | 20667665 | 1039 | 0 |
| hScc1 | Bcell | GSE12603 | 20643774 | 20644064 | 290 | 0 |
| hScc1 | Bcell | GSE12603 | 20658284 | 20658465 | 181 | 0 |
| hScc1 | Bcell | GSE12603 | 20666907 | 20667302 | 395 | 0 |
| p130 | shRbSenescent | GSE19898 | 20666781 | 20667439 | 658 | 0 |
Validated miRNA targets