Annotation Detail for CHRFAM7A
Basic Information Top
| Gene Symbol: | CHRFAM7A ( CHRNA7,CHRNA7-DR1,D-10,MGC120482,MGC120483 ) |
|---|---|
| Gene Full Name: | CHRNA7 (cholinergic receptor, nicotinic, alpha 7, exons 5-10) and FAM7A (family with sequence similarity 7A, exons A-E) fusion |
| Band: | 15q13.2 |
| Quick Links | Entrez ID:89832; OMIM: 609756; Uniprot ID:CRFM7_HUMAN; ENSEMBL ID: ENSG00000166664; HGNC ID: 15781 |
| Relate to Another Database: | SFARIGene; denovo-db |
| No data |
| No data |
| Location(AA) | Modification | Resource |
|---|---|---|
| 43 | N-linked | HMM predict |
| 50 | Phosphotyrosine(Jak) | HMM predict |
| 50 | Phosphotyrosine(Syk) | HMM predict |
| 100 | Phosphotyrosine(INSR) | HMM predict |
| 140 | Phosphothreonine(PKA) | HMM predict |
| 275 | Phosphoserine(PKG) | HMM predict |
| 275 | Phosphoserine(PKA) | HMM predict |
| 282 | Phosphoserine(IKK) | HMM predict |
| 290 | O-linked | HMM predict |
| 323 | Phosphoserine(ATM) | HMM predict |
- RefSeq ID: NM_148911
- Location:chr15 28440734-28473155
- strand:-
| Transcrip Factors | Experimental Cell | Database | TF Binding Start | TF Binding End | TF Binding Length | The Distance to Gene |
|---|---|---|---|---|---|---|
| CTCF | G2 | GSE9613 | 28474151 | 28474332 | 181 | 1086 |
| CTCF | G2 | GSE9613 | 28475845 | 28476260 | 415 | 2897 |
| CTCF | G2 | GSE9613 | 28477848 | 28479336 | 1488 | 5437 |
| CTCF | G2 | GSE9613 | 28483612 | 28484495 | 883 | 10898 |
| CTCF | G2 | GSE9613 | 28485051 | 28485683 | 632 | 12212 |
| H3ac | HepG2 | E | 28486168 | 28486423 | 255 | 13140 |
| hScc1 | Bcell | GSE12603 | 28475440 | 28475916 | 476 | 2523 |
| hScc1 | Bcell | GSE12603 | 28477848 | 28479767 | 1919 | 5652 |
| hScc1 | Bcell | GSE12603 | 28483427 | 28484227 | 800 | 10672 |
| hScc1 | Bcell | GSE12603 | 28485051 | 28485683 | 632 | 12212 |
| hScc1 | Bcell | GSE12603 | 28486209 | 28486669 | 460 | 13284 |
| hScc1 | Bcell | GSE12603 | 28489981 | 28490371 | 390 | 17021 |
| hScc1 | CdLS | GSE12603 | 28478266 | 28479078 | 812 | 5517 |
| Transcrip Factors | Experimental Cell | Database | TF Binding Start | TF Binding End | TF Binding Length | The Distance to Gene |
|---|---|---|---|---|---|---|
| NRSF | mAb | Jurkat | 28436253 | 28436564 | 311 | 4326 |
| hScc1 | Bcell | GSE12603 | 28427455 | 28427800 | 345 | 13107 |
| hScc1 | Bcell | GSE12603 | 28429922 | 28430173 | 251 | 10687 |
| Transcrip Factors | Experimental Cell | Database | TF Binding Start | TF Binding End | TF Binding Length | The Distance to Gene |
|---|---|---|---|---|---|---|
| CBP | T0-glioblastoma | GSE21026 | 28444956 | 28445339 | 383 | 0 |
| CTCF | G2 | GSE9613 | 28472938 | 28473135 | 197 | 0 |
| hScc1 | Bcell | GSE12603 | 28441606 | 28441903 | 297 | 0 |
| hScc1 | Bcell | GSE12603 | 28472379 | 28473174 | 795 | 0 |
Validated miRNA targets| Cluster ID | Plue Type | Plus Gene Name | Plus Chromosome | Plus Start | Plus End | Overlap Length | Minus Type | Minus Gene Name | Minus Chromosome | Minus Star | Minus End | Type |
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 8567 | mRNA | chr15 | 28275408 | 28452960 | 168 | mRNA | CHRFAM7A | chr15 | 28440734 | 28473156 | Sense/Antisense (SA) pairs | |