AutismKB 2.0

Annotation Detail for FGD3


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Basic Information Top
Gene Symbol:FGD3 ( FLJ00004,MGC117260,ZFYVE5 )
Gene Full Name: FYVE, RhoGEF and PH domain containing 3
Band: 9q22.31
Quick LinksEntrez ID:89846; OMIM: NA; Uniprot ID:FGD3_HUMAN; ENSEMBL ID: ENSG00000127084; HGNC ID: 16027
Relate to Another Database: SFARIGene; denovo-db
Post Translation Modification Top
Location(AA) Modification
9Phosphothreonine.
128Phosphoserine.
Location(AA) Modifications Resource
Location(AA) Modification Resource
7O-linkedHMM predict
8O-linkedHMM predict
8Phosphoserine(PKA)HMM predict
8Phosphoserine(PKB)HMM predict
9O-linkedHMM predict
80Phosphoserine(CDC2)HMM predict
115Phosphoserine(ATM)HMM predict
121Phosphothreonine(MAPK)HMM predict
128Phosphoserine(CK1)HMM predict
136Phosphoserine(IKK)HMM predict
139Phosphothreonine(CDC2)HMM predict
139Phosphothreonine(MAPK)HMM predict
188Phosphothreonine(PKA)HMM predict
203N-linkedHMM predict
268Phosphoserine(CDC2)HMM predict
286N-linkedHMM predict
336N-linkedHMM predict
339N-linkedHMM predict
381Phosphoserine(PKG)HMM predict
384N-linkedHMM predict
446Phosphoserine(PKG)HMM predict
486Phosphoserine(CK2)HMM predict
486Phosphoserine(ATM)HMM predict
494Phosphoserine(CDC2)HMM predict
501O-linkedHMM predict
503Phosphoserine(IKK)HMM predict
503Phosphoserine(CDC2)HMM predict
526Phosphoserine(PKG)HMM predict
526Phosphoserine(PKC)HMM predict
540Phosphoserine(IKK)HMM predict
563S-palmitoylHMM predict
597O-linkedHMM predict
597Phosphothreonine(MAPK)HMM predict
599O-linkedHMM predict
599O-linkedHMM predict
599O-linkedHMM predict
605O-linkedHMM predict
614Phosphoserine(CK2)HMM predict
630O-linkedHMM predict
Validated transcription factor binding site by ChIP-Chip and ChIP-Seq
  • RefSeq ID: NM_033086
  • Location:chr9 94776602-94838334
  • strand:+
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
CTCF CD4GSE12889 94759310 94759689 379 17103
CTCF CD4SISSRdata 94759310 94759689 379 17103
Fos K562GSE19551 94772337 94772787 450 4041
No data
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
CBP T0-glioblastomaGSE21026 94830822 94831145 323 0
CTCF CD4GSE12889 94805815 94806122 307 0
CTCF CD4SISSRdata 94805815 94806122 307 0
FoxA1 MCF7MACSdata 94790556 94790938 382 0
KLF4 hESGSE17917 94794668 94794941 273 0
Oct1 H2O2-HelaGSE14283 94795800 94795830 30 0
RARA MCF7GSE15244 94776285 94776978 693 0
TFAP2C MCF7GSE21234 94776340 94777072 732 0
TFAP2C MCF7GSE21234 94790526 94791030 504 0
TFAP2C MCF7GSE21234 94822872 94823657 785 0
TFAP2C MCF7GSE21234 94827461 94828470 1009 0
hScc1 BcellGSE12603 94804813 94805148 335 0
hScc1 BcellGSE12603 94805801 94806773 972 0
hScc1 BcellGSE12603 94814916 94815554 638 0
hScc1 BcellGSE12603 94825584 94825862 278 0
Validated miRNA targets Top
Cis-Nats regulation Top
Cluster ID Plue Type Plus Gene Name Plus Chromosome Plus Start Plus End Overlap Length Minus Type Minus Gene Name Minus Chromosome Minus Star Minus End Type
26737 mRNA FGD3 chr9 92816336 92878069 286 mRNA chr9 92849951 92856781Sense/Antisense (SA) pairs

Simple Query:


  (e.g. CHD8)

Syndromic Genes

Non-syndromic Genes

AutismKB Statistics

  • Studies: 1,036
  • Genes: 1,379
  • CNVs/SVs: 5,420
  • SNVs/Indels: 11,669
  • de novo Mutations: 5,669
  • Mosaics: 789
  • Linkage Regions: 172
  • Paper Collected: 6/30/2018
  • Last Update: 8/26/2018


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