AutismKB 2.0

Annotation Detail for PAPLN


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Basic Information Top
Gene Symbol:PAPLN ( DKFZp434F053,MGC50452 )
Gene Full Name: papilin, proteoglycan-like sulfated glycoprotein
Band: 14q24.2
Quick LinksEntrez ID:89932; OMIM: NA; Uniprot ID:PPN_HUMAN; ENSEMBL ID: ENSG00000100767; HGNC ID: 19262
Relate to Another Database: SFARIGene; denovo-db
Post Translation Modification Top
Validated transcription factor binding site by ChIP-Chip and ChIP-Seq
  • RefSeq ID: NM_173462
  • Location:chr14 72774007-72811097
  • strand:+
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
CTCF G2GSE9613 72766514 72766687 173 7407
CTCF G2GSE9613 72773794 72774109 315 56
Rb shRbQuiescentGSE19898 72765823 72766063 240 8065
TFAP2C MCF7GSE21234 72770473 72770765 292 3389
TFAP2C MCF7GSE21234 72773649 72773966 317 200
hScc1 BcellGSE12603 72768290 72768564 274 5581
hScc1 BcellGSE12603 72773794 72773960 166 131
hScc1 CdLSGSE12603 72768077 72768749 672 5595
No data
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
CTCF G2GSE9613 72774400 72774741 341 0
CTCF G2GSE9613 72788235 72789125 890 0
CTCF G2GSE9613 72796952 72797131 179 0
CTCF G2GSE9613 72799137 72799348 211 0
CTCF G2GSE9613 72800232 72800569 337 0
ER E2-MCF7GSE14664 72800093 72800165 72 0
ER Fulvestrant-MCF7GSE14664 72800086 72800149 63 0
GABP HelaGSE8489 72783352 72784230 878 0
GABP k562GSE8489 72783352 72784230 878 0
Oct1 HelaGSE14283 72800069 72800143 74 0
P300 T30-glioblastomaGSE21026 72774749 72775607 858 0
RARG MCF7GSE15244 72810066 72810598 532 0
RNAII Tamoxifen-MCF7GSE14664 72800078 72800170 92 0
SRF k562GSE8489 72783352 72784230 878 0
TAF HelaGSE8489 72783352 72783947 595 0
TAF k562GSE8489 72783352 72784230 878 0
TFAP2C MCF7GSE21234 72787578 72788128 550 0
hScc1 BcellGSE12603 72774247 72774851 604 0
hScc1 BcellGSE12603 72776072 72776344 272 0
hScc1 BcellGSE12603 72796301 72796989 688 0
hScc1 BcellGSE12603 72806571 72807101 530 0
hScc1 CdLSGSE12603 72779153 72779429 276 0
Validated miRNA targets Top
Cis-Nats regulation Top
Cluster ID Plue Type Plus Gene Name Plus Chromosome Plus Start Plus End Overlap Length Minus Type Minus Gene Name Minus Chromosome Minus Star Minus End Type
8112 mRNA PAPLN chr14 72774007 72811098 464 EST chr14 72808642 72810542Sense/Antisense (SA) pairs

Simple Query:


  (e.g. CHD8)

Syndromic Genes

Non-syndromic Genes

AutismKB Statistics

  • Studies: 1,036
  • Genes: 1,379
  • CNVs/SVs: 5,420
  • SNVs/Indels: 11,669
  • de novo Mutations: 5,669
  • Mosaics: 789
  • Linkage Regions: 172
  • Paper Collected: 6/30/2018
  • Last Update: 8/26/2018


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