AutismKB 2.0

Annotation Detail for C9orf140


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Basic Information Top
Gene Symbol:C9orf140 ( p42.3 )
Gene Full Name: chromosome 9 open reading frame 140
Band: 9q34.3
Quick LinksEntrez ID:89958; OMIM: 612057; Uniprot ID:CI140_HUMAN; ENSEMBL ID: ENSG00000186193; HGNC ID:
Relate to Another Database: SFARIGene; denovo-db
Post Translation Modification Top
No data
No data
Location(AA) Modification Resource
20O-linkedHMM predict
177Phosphoserine(CK1)HMM predict
177Phosphoserine(ATM)HMM predict
219Phosphothreonine(PKA)HMM predict
284PhosphoserineHMM predict
318O-linkedHMM predict
318Phosphoserine(CDC2)HMM predict
319O-linkedHMM predict
320O-linkedHMM predict
329O-linkedHMM predict
331O-linkedHMM predict
382Phosphoserine(ATM)HMM predict
Validated transcription factor binding site by ChIP-Chip and ChIP-Seq
  • RefSeq ID: NM_178448
  • Location:chr9 139076596-139084848
  • strand:-
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
Fos K562GSE19551 139084558 139085216 658 39
p130 QuiescentGSE19898 139084758 139085132 374 97
p130 SenescentGSE19898 139084779 139085192 413 137
p130 shRbSenescentGSE19898 139084729 139085171 442 102
No data
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
CTCF CD4GSE12889 139078456 139078647 191 0
CTCF CD4GSE12889 139082061 139082383 322 0
CTCF CD4SISSRdata 139078456 139078647 191 0
CTCF CD4SISSRdata 139082061 139082383 322 0
CTCF HelaGSE12889 139078458 139078643 185 0
Stat6 IL-4-hr4GSE17850 139079829 139080407 578 0
hScc1 BcellGSE12603 139077801 139078876 1075 0
hScc1 BcellGSE12603 139079871 139080156 285 0
hScc1 BcellGSE12603 139080438 139080850 412 0
hScc1 BcellGSE12603 139082090 139082313 223 0
hScc1 BcellGSE12603 139084186 139084640 454 0
hScc1 CdLSGSE12603 139078253 139078914 661 0
Validated miRNA targets Top
Cis-Nats regulation Top

Simple Query:


  (e.g. CHD8)

Syndromic Genes

Non-syndromic Genes

AutismKB Statistics

  • Studies: 1,036
  • Genes: 1,379
  • CNVs/SVs: 5,420
  • SNVs/Indels: 11,669
  • de novo Mutations: 5,669
  • Mosaics: 789
  • Linkage Regions: 172
  • Paper Collected: 6/30/2018
  • Last Update: 8/26/2018


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