AutismKB 2.0

Annotation Detail for NOL3


View Evidences View Variants View Annotations
Basic Information Top
Gene Symbol:NOL3 ( ARC,FLJ35304,MYP,NOP,NOP30 )
Gene Full Name: nucleolar protein 3 (apoptosis repressor with CARD domain)
Band: 16q22.1
Quick LinksEntrez ID:8996; OMIM: 605235; Uniprot ID:NOL3_HUMAN; ENSEMBL ID: ENSG00000140939; HGNC ID: 7869
Relate to Another Database: SFARIGene; denovo-db
Post Translation Modification Top
No data
No data
Location(AA) Modification Resource
9Phosphoserine(CK1)HMM predict
45Phosphotyrosine(INSR)HMM predict
109Phosphothreonine(PKC)HMM predict
129Phosphothreonine(PKC)HMM predict
149Phosphoserine(ATM)HMM predict
149Phosphoserine(PKA)HMM predict
151Phosphoserine(ATM)HMM predict
163N-linkedHMM predict
167Phosphoserine(IKK)HMM predict
167Phosphoserine(ATM)HMM predict
167Phosphoserine(CK1)HMM predict
169Phosphoserine(IKK)HMM predict
169Phosphoserine(ATM)HMM predict
169Phosphoserine(CK1)HMM predict
171Phosphoserine(IKK)HMM predict
183N-linkedHMM predict
185Phosphoserine(IKK)HMM predict
187N-linkedHMM predict
191O-linkedHMM predict
191Phosphoserine(IKK)HMM predict
191Phosphoserine(CDC2)HMM predict
191Phosphoserine(CDK)HMM predict
193Phosphoserine(CDC2)HMM predict
195O-linkedHMM predict
195Phosphothreonine(PKC)HMM predict
196O-linkedHMM predict
200Phosphothreonine(PKC)HMM predict
201Phosphoserine(CDC2)HMM predict
Validated transcription factor binding site by ChIP-Chip and ChIP-Seq
  • RefSeq ID: NM_003946
  • Location:chr16 65765370-65767124
  • strand:+
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
ER Fulvestrant-MCF7GSE14664 65764405 65764438 33 949
H3K4me2 HCT116GSE10453 65764531 65764782 251 714
Oct1 HelaGSE14283 65764404 65764440 36 949
TAF HelaGSE8489 65764531 65764748 217 731
No data
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
CTCF CD4GSE12889 65765654 65765829 175 0
CTCF CD4SISSRdata 65765654 65765829 175 0
CTCF G2GSE9613 65765752 65766620 868 0
TFAP2C MCF7GSE21234 65765888 65766294 406 0
hScc1 BcellGSE12603 65765752 65766423 671 0
Validated miRNA targets Top
Micro RNA Name Stem Loop Name The chromosome that miRNA located Publication
hsa-let-7a hsa-let-7a-1 9 17942906
hsa-let-7a hsa-let-7a-2 11 17942906
hsa-let-7a hsa-let-7a-3 22 17942906
hsa-let-7a hsa-let-7a-1 9 17942906
hsa-let-7a hsa-let-7a-2 11 17942906
hsa-let-7a hsa-let-7a-3 22 17942906
hsa-let-7a hsa-let-7a-1 9 17942906
hsa-let-7a hsa-let-7a-2 11 17942906
hsa-let-7a hsa-let-7a-3 22 17942906
hsa-let-7a* hsa-let-7a-1 9 17942906
hsa-let-7a* hsa-let-7a-3 22 17942906
hsa-let-7a* hsa-let-7a-1 9 17942906
hsa-let-7a* hsa-let-7a-3 22 17942906
hsa-let-7a* hsa-let-7a-1 9 17942906
hsa-let-7a* hsa-let-7a-3 22 17942906
hsa-let-7b hsa-let-7b 22 17942906
hsa-let-7b hsa-let-7b 22 17942906
hsa-let-7b hsa-let-7b 22 17942906
hsa-let-7b* hsa-let-7b 22 17942906
hsa-let-7b* hsa-let-7b 22 17942906
hsa-let-7b* hsa-let-7b 22 17942906
hsa-let-7c hsa-let-7c 21 17942906
hsa-let-7c hsa-let-7c 21 17942906
hsa-let-7c hsa-let-7c 21 17942906
hsa-let-7c* hsa-let-7c 21 17942906
hsa-let-7c* hsa-let-7c 21 17942906
hsa-let-7c* hsa-let-7c 21 17942906
hsa-let-7d hsa-let-7d 9 17942906
hsa-let-7d hsa-let-7d 9 17942906
hsa-let-7d hsa-let-7d 9 17942906
hsa-let-7d* hsa-let-7d 9 17942906
hsa-let-7d* hsa-let-7d 9 17942906
hsa-let-7d* hsa-let-7d 9 17942906
hsa-let-7e hsa-let-7e 19 17942906
hsa-let-7e hsa-let-7e 19 17942906
hsa-let-7e hsa-let-7e 19 17942906
hsa-let-7e* hsa-let-7e 19 17942906
hsa-let-7e* hsa-let-7e 19 17942906
hsa-let-7e* hsa-let-7e 19 17942906
hsa-let-7f hsa-let-7f-1 9 17942906
hsa-let-7f hsa-let-7f-2 X 17942906
hsa-let-7f hsa-let-7f-1 9 17942906
hsa-let-7f hsa-let-7f-2 X 17942906
hsa-let-7f hsa-let-7f-1 9 17942906
hsa-let-7f hsa-let-7f-2 X 17942906
hsa-let-7f-1* hsa-let-7f-1 9 17942906
hsa-let-7f-1* hsa-let-7f-1 9 17942906
hsa-let-7f-1* hsa-let-7f-1 9 17942906
hsa-let-7f-2* hsa-let-7f-2 X 17942906
hsa-let-7f-2* hsa-let-7f-2 X 17942906
hsa-let-7f-2* hsa-let-7f-2 X 17942906
hsa-let-7g hsa-let-7g 3 17942906
hsa-let-7g hsa-let-7g 3 20309945
hsa-let-7g hsa-let-7g 3 17942906
hsa-let-7g hsa-let-7g 3 20309945
hsa-let-7g hsa-let-7g 3 17942906
hsa-let-7g hsa-let-7g 3 20309945
hsa-let-7g* hsa-let-7g 3 17942906
hsa-let-7g* hsa-let-7g 3 20309945
hsa-let-7g* hsa-let-7g 3 17942906
hsa-let-7g* hsa-let-7g 3 20309945
hsa-let-7g* hsa-let-7g 3 17942906
hsa-let-7g* hsa-let-7g 3 20309945
hsa-let-7i hsa-let-7i 12 17942906
hsa-let-7i hsa-let-7i 12 17942906
hsa-let-7i hsa-let-7i 12 17942906
hsa-let-7i* hsa-let-7i 12 17942906
hsa-let-7i* hsa-let-7i 12 17942906
hsa-let-7i* hsa-let-7i 12 17942906
hsa-miR-24 hsa-mir-24-1 9 19748357
hsa-miR-24 hsa-mir-24-2 19 19748357
hsa-miR-24 hsa-mir-24-1 9 19748357
hsa-miR-24 hsa-mir-24-2 19 19748357
hsa-miR-24 hsa-mir-24-1 9 19748357
hsa-miR-24 hsa-mir-24-2 19 19748357
hsa-miR-34a hsa-mir-34a 1 19696787
hsa-miR-34a hsa-mir-34a 1 19696787
hsa-miR-34a hsa-mir-34a 1 19696787
hsa-miR-34a* hsa-mir-34a 1 19696787
hsa-miR-34a* hsa-mir-34a 1 19696787
hsa-miR-34a* hsa-mir-34a 1 19696787
hsa-miR-98 hsa-mir-98 X 17942906
hsa-miR-98 hsa-mir-98 X 17942906
hsa-miR-98 hsa-mir-98 X 17942906
No data
Cis-Nats regulation Top
Cluster ID Plue Type Plus Gene Name Plus Chromosome Plus Start Plus End Overlap Length Minus Type Minus Gene Name Minus Chromosome Minus Star Minus End Type
10121 mRNA NOL3 chr16 65765370 65767125 118 mRNA LOC283849 chr16 65767007 65781580Sense/Antisense (SA) pairs

Simple Query:


  (e.g. CHD8)

Syndromic Genes

Non-syndromic Genes

AutismKB Statistics

  • Studies: 1,036
  • Genes: 1,379
  • CNVs/SVs: 5,420
  • SNVs/Indels: 11,669
  • de novo Mutations: 5,669
  • Mosaics: 789
  • Linkage Regions: 172
  • Paper Collected: 6/30/2018
  • Last Update: 8/26/2018


Copyright © 2017, Center for Bioinformatics , Peking University | All Rights Reserved