AutismKB 2.0

Annotation Detail for TSR2


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Basic Information Top
Gene Symbol:TSR2 ( DT1P1A10,MGC20451,WGG1 )
Gene Full Name: TSR2, 20S rRNA accumulation, homolog (S. cerevisiae)
Band: Xp11.22
Quick LinksEntrez ID:90121; OMIM: NA; Uniprot ID:TSR2_HUMAN; ENSEMBL ID: ENSG00000158526; HGNC ID: 25455
Relate to Another Database: SFARIGene; denovo-db
Post Translation Modification Top
No data
No data
Location(AA) Modification Resource
142Phosphoserine(CK1)HMM predict
142Phosphoserine(CK2)HMM predict
167O-linkedHMM predict
167Phosphoserine(CK1)HMM predict
167Phosphoserine(ATM)HMM predict
Validated transcription factor binding site by ChIP-Chip and ChIP-Seq
  • RefSeq ID: NM_058163
  • Location:chrX 54483577-54488452
  • strand:+
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
CTCF CD4GSE12889 54466465 54466712 247 16989
CTCF CD4SISSRdata 54466465 54466712 247 16989
P300 T30-glioblastomaGSE21026 54483141 54483850 709 82
Rb GrowingGSE19898 54483484 54483599 115 36
Rb SenescentGSE19898 54483218 54483784 566 77
Rb shRbQuiescentGSE19898 54470815 54471022 207 12659
Rb shRbQuiescentGSE19898 54480021 54480248 227 3443
TAFII hESGSE17917 54483369 54483680 311 53
hScc1 BcellGSE12603 54466350 54466701 351 17052
hScc1 CdLSGSE12603 54466350 54466701 351 17052
hScc1 G2GSE9613 54466350 54466701 351 17052
p130 QuiescentGSE19898 54483199 54483821 622 68
No data
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
CTCF G2GSE9613 54483438 54484017 579 0
CTCF G2GSE9613 54487958 54488175 217 0
ETS1 JurkatGSE17954 54483075 54484121 1046 0
H3K4me3 colorectalcancer 54483777 54484017 240 0
H3K4me3 colorectalcancer 54484568 54484756 188 0
H3ac HepG2E 54484568 54485936 1368 0
P300 T0-glioblastomaGSE21026 54483374 54483796 422 0
PHF8 HeLaGSE20725 54483164 54484116 952 0
Rb QuiescentGSE19898 54483479 54483689 210 0
TAF k562GSE8489 54483329 54484017 688 0
TAF k562GSE8489 54484568 54485936 1368 0
USF1 HepG2E 54483329 54484017 688 0
USF1 HepG2E 54484568 54485716 1148 0
USF2 HepG2E 54483329 54484017 688 0
hScc1 BcellGSE12603 54483587 54484017 430 0
hScc1 G2GSE9613 54483329 54484017 688 0
p130 SenescentGSE19898 54483331 54483876 545 0
p130 shRbQuiescentGSE19898 54483386 54484152 766 0
p130 shRbSenescentGSE19898 54483221 54483987 766 0
Validated miRNA targets Top
Cis-Nats regulation Top
Cluster ID Plue Type Plus Gene Name Plus Chromosome Plus Start Plus End Overlap Length Minus Type Minus Gene Name Minus Chromosome Minus Star Minus End Type
27697 mRNA RP1-112K5.2 chrX 54349878 54354940 31 mRNA FGD1 chrX 54354909 54405620Sense/Antisense (SA) pairs

Simple Query:


  (e.g. CHD8)

Syndromic Genes

Non-syndromic Genes

AutismKB Statistics

  • Studies: 1,036
  • Genes: 1,379
  • CNVs/SVs: 5,420
  • SNVs/Indels: 11,669
  • de novo Mutations: 5,669
  • Mosaics: 789
  • Linkage Regions: 172
  • Paper Collected: 6/30/2018
  • Last Update: 8/26/2018


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