Annotation Detail for TAF1B
Basic Information Top
| Gene Symbol: | TAF1B ( MGC:9349,RAF1B,RAFI63,SL1,TAFI63 ) |
|---|---|
| Gene Full Name: | TATA box binding protein (TBP)-associated factor, RNA polymerase I, B, 63kDa |
| Band: | 2p25.1 |
| Quick Links | Entrez ID:9014; OMIM: 604904; Uniprot ID:TAF1B_HUMAN; ENSEMBL ID: ENSG00000115750; HGNC ID: 11533 |
| Relate to Another Database: | SFARIGene; denovo-db |
| Location(AA) | Modification | |
|---|---|---|
| 440 | N6-acetyllysine. | |
| Location(AA) | Modifications | Resource |
|---|
| Location(AA) | Modification | Resource |
|---|---|---|
| 36 | N-linked | HMM predict |
| 41 | Phosphotyrosine(EGFR) | HMM predict |
| 66 | N-linked | HMM predict |
| 67 | N-linked | HMM predict |
| 128 | Phosphothreonine(PKC) | HMM predict |
| 138 | N-linked | HMM predict |
| 140 | Phosphoserine(CK1) | HMM predict |
| 166 | Phosphoserine(CK2) | HMM predict |
| 166 | Phosphoserine(ATM) | HMM predict |
| 184 | Phosphoserine(IKK) | HMM predict |
| 186 | O-linked | HMM predict |
| 187 | O-linked | HMM predict |
| 199 | Phosphoserine(ATM) | HMM predict |
| 274 | Phosphotyrosine(INSR) | HMM predict |
| 274 | Sulfotyrosine | HMM predict |
| 278 | Phosphotyrosine(Syk) | HMM predict |
| 278 | Phosphotyrosine(EGFR) | HMM predict |
| 301 | Phosphotyrosine(Jak) | HMM predict |
| 474 | Phosphoserine(CDK) | HMM predict |
| 478 | N-linked | HMM predict |
| 522 | S-palmitoyl | HMM predict |
| 535 | Phosphotyrosine(INSR) | HMM predict |
| 535 | Phosphotyrosine(SRC) | HMM predict |
| 536 | Phosphoserine(CK1) | HMM predict |
| 574 | Phosphoserine(PKC) | HMM predict |
| 580 | Phosphoserine(PKG) | HMM predict |
- RefSeq ID: NM_005680
- Location:chr2 9901023-9991993
- strand:+
| Transcrip Factors | Experimental Cell | Database | TF Binding Start | TF Binding End | TF Binding Length | The Distance to Gene |
|---|---|---|---|---|---|---|
| Oct1 | H2O2-Hela | GSE14283 | 9883199 | 9883226 | 27 | 17811 |
| Oct1 | Hela | GSE14283 | 9883195 | 9883226 | 31 | 17813 |
| PHF8 | 293T | GSE20725 | 9900315 | 9901503 | 1188 | 115 |
| PHF8 | HeLa | GSE20725 | 9900203 | 9901711 | 1508 | 67 |
| Stat6 | IL-4-hr4 | GSE17850 | 9895801 | 9896623 | 822 | 4812 |
| Transcrip Factors | Experimental Cell | Database | TF Binding Start | TF Binding End | TF Binding Length | The Distance to Gene |
|---|---|---|---|---|---|---|
| CTCF | G2 | GSE9613 | 9992806 | 9993026 | 220 | 923 |
| CTCF | G2 | GSE9613 | 9995557 | 9995720 | 163 | 3645 |
| KLF4 | hES | GSE17917 | 9999516 | 9999782 | 266 | 7656 |
| Transcrip Factors | Experimental Cell | Database | TF Binding Start | TF Binding End | TF Binding Length | The Distance to Gene |
|---|---|---|---|---|---|---|
| CTCF | G2 | GSE9613 | 9901094 | 9901449 | 355 | 0 |
| Fos | K562 | GSE19551 | 9971984 | 9972757 | 773 | 0 |
| H3K4me2 | HCT116 | GSE10453 | 9902040 | 9902469 | 429 | 0 |
| H3ac | HepG2 | E | 9902040 | 9902605 | 565 | 0 |
| Myc | K562 | GSE19551 | 9972092 | 9972642 | 550 | 0 |
| Oct1 | H2O2-Hela | GSE14283 | 9970647 | 9970684 | 37 | 0 |
| Oct1 | Hela | GSE14283 | 9955261 | 9955299 | 38 | 0 |
| Oct1 | Hela | GSE14283 | 9970647 | 9970683 | 36 | 0 |
| P300 | T30-glioblastoma | GSE21026 | 9954921 | 9955589 | 668 | 0 |
| P300 | T30-glioblastoma | GSE21026 | 9972035 | 9972704 | 669 | 0 |
| RNAII | Tamoxifen-MCF7 | GSE14664 | 9966390 | 9966476 | 86 | 0 |
| TFAP2C | MCF7 | GSE21234 | 9954997 | 9955446 | 449 | 0 |
| USF1 | HepG2 | E | 9917853 | 9918503 | 650 | 0 |
| hScc1 | Bcell | GSE12603 | 9972412 | 9972600 | 188 | 0 |
| hScc1 | G2 | GSE9613 | 9900769 | 9901510 | 741 | 0 |
Validated miRNA targets