Annotation Detail for TMEM41A
Basic Information Top
| Gene Symbol: | TMEM41A ( 2900010K02Rik,DKFZp686N06149,DKFZp686N107,MGC15397 ) |
|---|---|
| Gene Full Name: | transmembrane protein 41A |
| Band: | 3q27.2 |
| Quick Links | Entrez ID:90407; OMIM: NA; Uniprot ID:TM41A_HUMAN; ENSEMBL ID: ENSG00000163900; HGNC ID: 30544 |
| Relate to Another Database: | SFARIGene; denovo-db |
| Location(AA) | Modification | |
|---|---|---|
| 250 | N-linked (GlcNAc...) (Potential). | |
| Location(AA) | Modifications | Resource |
|---|---|---|
| 250 | N-linked (GlcNAc...) (Potential). | Swiss-Prot 53.0 |
| Location(AA) | Modification | Resource |
|---|---|---|
| 108 | S-palmitoyl | HMM predict |
| 109 | S-palmitoyl | HMM predict |
| 205 | O-linked | HMM predict |
| 205 | Phosphoserine(IKK) | HMM predict |
| 250 | N-linked | HMM predict |
| 256 | N-linked | HMM predict |
- RefSeq ID: NM_080652
- Location:chr3 186691494-186699495
- strand:-
| Transcrip Factors | Experimental Cell | Database | TF Binding Start | TF Binding End | TF Binding Length | The Distance to Gene |
|---|---|---|---|---|---|---|
| CTCF | G2 | GSE9613 | 186700818 | 186701045 | 227 | 1436 |
| FOXA1 | MCF7 | GSE15244 | 186703440 | 186703775 | 335 | 4112 |
| RARA | MCF7 | GSE15244 | 186703440 | 186703635 | 195 | 4042 |
| Transcrip Factors | Experimental Cell | Database | TF Binding Start | TF Binding End | TF Binding Length | The Distance to Gene |
|---|---|---|---|---|---|---|
| CTCF | G2 | GSE9613 | 186691127 | 186691428 | 301 | 217 |
| p63 | keratinocytes | GSE17611 | 186689583 | 186690579 | 996 | 1414 |
| Transcrip Factors | Experimental Cell | Database | TF Binding Start | TF Binding End | TF Binding Length | The Distance to Gene |
|---|---|---|---|---|---|---|
| CTCF | Jurkat | GSE12889 | 186695115 | 186695268 | 153 | 0 |
| CTCF | G2 | GSE9613 | 186695568 | 186695900 | 332 | 0 |
| CTCF | G2 | GSE9613 | 186696925 | 186697521 | 596 | 0 |
| CTCF | G2 | GSE9613 | 186698776 | 186699733 | 957 | 0 |
| ETS1 | Jurkat | GSE17954 | 186698985 | 186699794 | 809 | 0 |
| FOXA1 | MCF7 | GSE15244 | 186698776 | 186699555 | 779 | 0 |
| H3K4me2 | HCT116 | GSE10453 | 186697560 | 186698425 | 865 | 0 |
| H3K4me3 | colorectal | cancer | 186697896 | 186698425 | 529 | 0 |
| H3K4me3 | colorectal | cancer | 186698776 | 186699065 | 289 | 0 |
| H3ac | HepG2 | E | 186696998 | 186698425 | 1427 | 0 |
| H3ac | HepG2 | E | 186698776 | 186699141 | 365 | 0 |
| Myc | K562 | GSE19551 | 186698803 | 186700085 | 1282 | 0 |
| Myc | hES | GSE17917 | 186699320 | 186699553 | 233 | 0 |
| P300 | T30-glioblastoma | GSE21026 | 186698922 | 186699938 | 1016 | 0 |
| PHF8 | HeLa | GSE20725 | 186698790 | 186700006 | 1216 | 0 |
| RARA | MCF7 | GSE15244 | 186698776 | 186698906 | 130 | 0 |
| Rb | Senescent | GSE19898 | 186699171 | 186699630 | 459 | 0 |
| VDR | GM10855-stim | GSE22484 | 186698756 | 186700178 | 1422 | 0 |
| VDR | GM10861-Unstim | GSE22484 | 186698611 | 186700192 | 1581 | 0 |
| VDR | GM10861-stim | GSE22484 | 186698603 | 186700165 | 1562 | 0 |
| hScc1 | Bcell | GSE12603 | 186698848 | 186699769 | 921 | 0 |
| hScc1 | CdLS | GSE12603 | 186698776 | 186699696 | 920 | 0 |
| hScc1 | G2 | GSE9613 | 186698776 | 186699733 | 957 | 0 |
| p130 | shRbSenescent | GSE19898 | 186699072 | 186699767 | 695 | 0 |
Validated miRNA targets