AutismKB 2.0

Annotation Detail for IFT20


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Basic Information Top
Gene Symbol:IFT20 ( - )
Gene Full Name: intraflagellar transport 20 homolog (Chlamydomonas)
Band: 17q11.2
Quick LinksEntrez ID:90410; OMIM: NA; Uniprot ID:IFT20_HUMAN; ENSEMBL ID: ENSG00000109083; HGNC ID: 30989
Relate to Another Database: SFARIGene; denovo-db
Post Translation Modification Top
Validated transcription factor binding site by ChIP-Chip and ChIP-Seq
  • RefSeq ID: NM_174887
  • Location:chr17 23679479-23686621
  • strand:-
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
ETS1 JurkatGSE17954 23685937 23687503 1566 99
NFkBII GM18526GSE19485 23686167 23687141 974 33
Oct4 hESGSE17917 23686446 23686813 367 8
PHF8 293TGSE20725 23686182 23687327 1145 133
TFAP2C MCF7GSE21234 23686359 23687025 666 71
No data
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
CTCF G2GSE9613 23686127 23686664 537 0
GABP HelaGSE8489 23685103 23686764 1661 0
GABP k562GSE8489 23685103 23686622 1519 0
H3K4me2 HCT116GSE10453 23685424 23686195 771 0
H3K4me3 colorectalcancer 23685389 23686230 841 0
H3ac HepG2E 23685138 23686445 1307 0
KLF4 hESGSE17917 23679416 23679688 272 0
Oct1 HelaGSE14283 23679578 23679611 33 0
Oct1 HelaGSE14283 23684637 23684674 37 0
RARG MCF7GSE15244 23685458 23686195 737 0
hScc1 BcellGSE12603 23683222 23683404 182 0
hScc1 BcellGSE12603 23686278 23686477 199 0
hScc1 CdLSGSE12603 23686230 23686622 392 0
p130 QuiescentGSE19898 23686213 23686430 217 0
p130 SenescentGSE19898 23685991 23686802 811 0
p130 shRbSenescentGSE19898 23686020 23687031 1011 0
Validated miRNA targets Top
Cis-Nats regulation Top

Simple Query:


  (e.g. CHD8)

Syndromic Genes

Non-syndromic Genes

AutismKB Statistics

  • Studies: 1,036
  • Genes: 1,379
  • CNVs/SVs: 5,420
  • SNVs/Indels: 11,669
  • de novo Mutations: 5,669
  • Mosaics: 789
  • Linkage Regions: 172
  • Paper Collected: 6/30/2018
  • Last Update: 8/26/2018