Annotation Detail for ZNF622

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Basic Information Top

Gene Symbol:	ZNF622 ( MGC17552,MGC2485,ZPR9 )
Gene Full Name:	zinc finger protein 622
Band:	5p15.1
Quick Links	Entrez ID:90441; OMIM: 608694; Uniprot ID:ZN622_HUMAN; ENSEMBL ID: ENSG00000173545; HGNC ID: 30958
Relate to Another Database:	SFARIGene; denovo-db

Post Translation Modification

Location(AA)	Modification
276	Phosphoserine.

Validated transcription factor binding site by ChIP-Chip and ChIP-Seq

Transcrip Factors	Experimental Cell	Database	TF Binding Start	TF Binding End	TF Binding Length	The Distance to Gene
ETS1	Jurkat	GSE17954	16518391	16519539	1148	72
H3K4me2	HCT116	GSE10453	16520094	16520401	307	1354
H3ac	HepG2	E	16520094	16520545	451	1426
TAF	Hela	GSE8489	16522050	16522447	397	3355
hScc1	CdLS	GSE12603	16520365	16520545	180	1562
p130	Quiescent	GSE19898	16518605	16519213	608	16
p130	Senescent	GSE19898	16518616	16519517	901	173
p130	shRbQuiescent	GSE19898	16518665	16519575	910	227

Transcrip Factors	Experimental Cell	Database	TF Binding Start	TF Binding End	TF Binding Length	The Distance to Gene
Oct1	H2O2-Hela	GSE14283	16504156	16504188	32	457

Transcrip Factors	Experimental Cell	Database	TF Binding Start	TF Binding End	TF Binding Length
CTCF	Jurkat	GSE12889	16509480	16509629	149
CTCF	G2	GSE9613	16508980	16509995	1015
CTCF	G2	GSE9613	16518160	16519067	907
GABP	k562	GSE8489	16515786	16517222	1436
GABP	k562	GSE8489	16517620	16519448	1828
H3K4me3	colorectal	cancer	16516515	16517144	629
H3K4me3	colorectal	cancer	16517620	16518231	611
H3ac	HepG2	E	16517620	16518850	1230
Oct1	H2O2-Hela	GSE14283	16518667	16518721	54
Oct1	Hela	GSE14283	16518671	16518724	53
PHF8	293T	GSE20725	16518120	16519573	1453
PHF8	HeLa	GSE20725	16517818	16519911	2093
TAF	Hela	GSE8489	16517620	16519448	1828
TAFII	hES	GSE17917	16518512	16519203	691
hScc1	Bcell	GSE12603	16509157	16509700	543
hScc1	CdLS	GSE12603	16509157	16509665	508
hScc1	G2	GSE9613	16509122	16509995	873

Validated miRNA targets

Micro RNA Name	Stem Loop Name	The chromosome that miRNA located	Publication
hsa-let-7b	hsa-let-7b	22	18668040
hsa-let-7b*	hsa-let-7b	22	18668040
hsa-miR-1	hsa-mir-1-2	18	18668040
hsa-miR-1	hsa-mir-1-1	20	18668040
hsa-miR-155	hsa-mir-155	21	18668040
hsa-miR-155*	hsa-mir-155	21	18668040
hsa-miR-16	hsa-mir-16-1	13	18668040
hsa-miR-16	hsa-mir-16-2	3	18668040
hsa-miR-30a	hsa-mir-30a	6	18668040
hsa-miR-30a*	hsa-mir-30a	6	18668040
hsa-miR-30b	hsa-mir-30b	8	18668040
hsa-miR-30b*	hsa-mir-30b	8	18668040
hsa-miR-30c	hsa-mir-30c-2	6	18668040
hsa-miR-30c	hsa-mir-30c-1	1	18668040
hsa-miR-30c-1*	hsa-mir-30c-1	1	18668040
hsa-miR-30c-2*	hsa-mir-30c-2	6	18668040
hsa-miR-30d	hsa-mir-30d	8	18668040
hsa-miR-30d*	hsa-mir-30d	8	18668040
hsa-miR-30e	hsa-mir-30e	1	18668040
hsa-miR-30e*	hsa-mir-30e	1	18668040

ID in Tarbase	Data Type	Support Type	miRNA	Gene	Direct Support	Publication
1119	Unknown	pSILAC	miR-16	ZNF622	down 50-25%	18668040
Ensembl	Protein Type	Differentially expressed in	Pathology or Event	Mis Regulation	Gene Expression	Tumour Involvement
ENSG00000173545		n_a	n_a	n_a	"epithelium, lymphoblast, lymphocyte, muscle cell"	"benign tumour, malignant tumour, carcinoma, leukaemia, sarcoma"

Cis-Nats regulation

Simple Query:

Paper Collected: 6/30/2018

Last Update: 8/26/2018