Annotation Detail for CCNT2
Basic Information Top
| Gene Symbol: | CCNT2 ( FLJ90560,MGC134840 ) |
|---|---|
| Gene Full Name: | cyclin T2 |
| Band: | 2q21.3 |
| Quick Links | Entrez ID:905; OMIM: 603862; Uniprot ID:CCNT2_HUMAN; ENSEMBL ID: ENSG00000082258; HGNC ID: 1600 |
| Relate to Another Database: | SFARIGene; denovo-db |
| Location(AA) | Modification | |
|---|---|---|
| 475 | Phosphoserine. | |
| 476 | Phosphoserine. | |
| 477 | Phosphoserine. | |
| 479 | Phosphothreonine. | |
| 480 | Phosphoserine. | |
| 536 | Phosphoserine. | |
| 537 | Phosphoserine. | |
| 538 | Phosphoserine. | |
| 542 | Phosphoserine. | |
| 549 | Phosphoserine. | |
| 590 | Phosphoserine. | |
| 597 | Phosphothreonine. | |
| 601 | Phosphoserine. | |
| Location(AA) | Modifications | Resource |
|---|---|---|
| 480 | Phosphoserine. | Swiss-Prot 53.0 |
| 480 | Phosphoserine | Phospho.ELM 6.0 |
| Location(AA) | Modification | Resource |
|---|---|---|
| 21 | Phosphothreonine(MAPK) | HMM predict |
| 23 | Phosphoserine(MAPK) | HMM predict |
| 52 | N-linked | HMM predict |
| 199 | S-palmitoyl | HMM predict |
| 247 | Phosphothreonine(CDC2) | HMM predict |
| 298 | N-linked | HMM predict |
| 307 | O-linked | HMM predict |
| 325 | Phosphoserine(IKK) | HMM predict |
| 364 | Phosphotyrosine(Abl) | HMM predict |
| 365 | Phosphoserine(ATM) | HMM predict |
| 371 | Phosphoserine(CK1) | HMM predict |
| 371 | Phosphoserine(IKK) | HMM predict |
| 373 | Phosphoserine(CK1) | HMM predict |
| 375 | Phosphoserine(ATM) | HMM predict |
| 416 | Phosphoserine(CK1) | HMM predict |
| 470 | Phosphoserine(ATM) | HMM predict |
| 470 | Phosphoserine(IKK) | HMM predict |
| 474 | O-linked | HMM predict |
| 476 | O-linked | HMM predict |
| 477 | Phosphoserine(CK1) | HMM predict |
| 477 | Phosphoserine(IKK) | HMM predict |
| 480 | O-linked | HMM predict |
| 480 | Phosphoserine(CDC2) | HMM predict |
| 502 | Phosphoserine(CK2) | HMM predict |
| 519 | Phosphoserine(CK2) | HMM predict |
| 519 | Phosphoserine(CK1) | HMM predict |
| 536 | Phosphoserine | HMM predict |
| 536 | Phosphoserine(CK1) | HMM predict |
| 537 | Phosphoserine(PKB) | HMM predict |
| 537 | Phosphoserine(CK1) | HMM predict |
| 538 | Phosphoserine(CK1) | HMM predict |
| 548 | Phosphoserine(CK1) | HMM predict |
| 580 | Phosphoserine(IKK) | HMM predict |
| 582 | Phosphoserine(CK1) | HMM predict |
| 584 | Phosphoserine(ATM) | HMM predict |
| 601 | Phosphoserine(CDC2) | HMM predict |
| 601 | Phosphoserine(CDK) | HMM predict |
| 616 | Phosphoserine(CDC2) | HMM predict |
| 632 | O-linked | HMM predict |
| 635 | Phosphoserine(CK1) | HMM predict |
| 643 | Phosphoserine(CK2) | HMM predict |
| 649 | Phosphoserine(CDC2) | HMM predict |
| 649 | Phosphoserine(CK1) | HMM predict |
| 650 | Phosphoserine(CK1) | HMM predict |
| 703 | Sulfotyrosine | HMM predict |
| 704 | Phosphoserine(CK1) | HMM predict |
| 712 | Phosphotyrosine(Syk) | HMM predict |
- RefSeq ID: NM_001241
- Location:chr2 135392862-135431053
- strand:+
| Transcrip Factors | Experimental Cell | Database | TF Binding Start | TF Binding End | TF Binding Length | The Distance to Gene |
|---|---|---|---|---|---|---|
| CTCF | G2 | GSE9613 | 135391918 | 135393430 | 1512 | 189 |
| ETS1 | Jurkat | GSE17954 | 135391542 | 135393511 | 1969 | 336 |
| H3ac | HepG2 | E | 135391880 | 135392293 | 413 | 776 |
| HIF1 | Norm | HepG2 | 135392398 | 135393140 | 742 | 94 |
| PHF8 | 293T | GSE20725 | 135391777 | 135392723 | 946 | 613 |
| PHF8 | HeLa | GSE20725 | 135391598 | 135393605 | 2007 | 261 |
| PHF8 | Hs68plusFBS | GSE20725 | 135391726 | 135393801 | 2075 | 99 |
| PolII | HeLa | GSE12783 | 135391344 | 135394116 | 2772 | 133 |
| Rb | Quiescent | GSE19898 | 135392730 | 135392961 | 231 | 17 |
| TAF | k562 | GSE8489 | 135391880 | 135392293 | 413 | 776 |
| hScc1 | Bcell | GSE12603 | 135392056 | 135392609 | 553 | 530 |
| p130 | shRbQuiescent | GSE19898 | 135391933 | 135393700 | 1767 | 46 |
| p130 | shRbSenescent | GSE19898 | 135392142 | 135393227 | 1085 | 178 |
| No data |
| Transcrip Factors | Experimental Cell | Database | TF Binding Start | TF Binding End | TF Binding Length | The Distance to Gene |
|---|---|---|---|---|---|---|
| H3K4me3 | colorectal | cancer | 135393283 | 135394133 | 850 | 0 |
| H3ac | HepG2 | E | 135393049 | 135394070 | 1021 | 0 |
| Myc | hES | GSE17917 | 135393098 | 135393346 | 248 | 0 |
| TAF | Hela | GSE8489 | 135393347 | 135394105 | 758 | 0 |
| TAF | k562 | GSE8489 | 135393140 | 135394574 | 1434 | 0 |
| Micro RNA Name | Stem Loop Name | The chromosome that miRNA located | Publication |
|---|---|---|---|
| hsa-let-7b | hsa-let-7b | 22 | 15131085 |
| hsa-let-7b* | hsa-let-7b | 22 | 15131085 |
| hsa-let-7e | hsa-let-7e | 19 | 15131085 |
| hsa-let-7e* | hsa-let-7e | 19 | 15131085 |
| hsa-miR-103 | hsa-mir-103-2 | 20 | 15131085 |
| hsa-miR-103 | hsa-mir-103-1 | 5 | 15131085 |
| hsa-miR-141 | hsa-mir-141 | 12 | 15131085 |
| hsa-miR-141* | hsa-mir-141 | 12 | 15131085 |
| hsa-miR-145 | hsa-mir-145 | 5 | 15131085 |
| hsa-miR-145* | hsa-mir-145 | 5 | 15131085 |
| hsa-miR-15a | hsa-mir-15a | 13 | 15131085 |
| hsa-miR-15a* | hsa-mir-15a | 13 | 15131085 |
| hsa-miR-15b | hsa-mir-15b | 3 | 15131085 |
| hsa-miR-15b* | hsa-mir-15b | 3 | 15131085 |
| hsa-miR-16 | hsa-mir-16-1 | 13 | 15131085 |
| hsa-miR-16 | hsa-mir-16-2 | 3 | 15131085 |
| hsa-miR-199b-3p | hsa-mir-199b | 9 | 15131085 |
| hsa-miR-199b-5p | hsa-mir-199b | 9 | 15131085 |
| hsa-miR-23a | hsa-mir-23a | 19 | 15131085 |
| hsa-miR-23a* | hsa-mir-23a | 19 | 15131085 |
| hsa-miR-24 | hsa-mir-24-1 | 9 | 15131085 |
| hsa-miR-24 | hsa-mir-24-2 | 19 | 15131085 |
| ID in Tarbase | Data Type | Support Type | miRNA | Gene | Direct Support | Publication |
|---|---|---|---|---|---|---|
| 489 | Unknown | FALSE | miR-16 | CCNT2 | in vitro reporter gene assay (Luciferase) | 15131085 |
| Ensembl | Protein Type | Differentially expressed in | Pathology or Event | Mis Regulation | Gene Expression | Tumour Involvement |
| ENSG00000082258 | n_a | n_a | n_a | n_a | n_a |
Cis-Nats regulation