AutismKB 2.0

Annotation Detail for SLC13A2


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Basic Information Top
Gene Symbol:SLC13A2 ( NADC1,NaCT,NaDC-1,SDCT1 )
Gene Full Name: solute carrier family 13 (sodium-dependent dicarboxylate transporter), member 2
Band: 17q11.2
Quick LinksEntrez ID:9058; OMIM: 604148; Uniprot ID:S13A2_HUMAN; ENSEMBL ID: ENSG00000007216; HGNC ID: 10917
Relate to Another Database: SFARIGene; denovo-db
Post Translation Modification Top
No data
No data
Location(AA) Modification Resource
145O-linkedHMM predict
162Phosphoserine(ATM)HMM predict
174N-linkedHMM predict
183Phosphoserine(CDC2)HMM predict
211Phosphoserine(ATM)HMM predict
224S-palmitoylHMM predict
226S-palmitoylHMM predict
449Phosphothreonine(MAPK)HMM predict
475O-linkedHMM predict
475Phosphoserine(IKK)HMM predict
575N-linkedHMM predict
576O-linkedHMM predict
586N-linkedHMM predict
586AsparagineHMM predict
Validated transcription factor binding site by ChIP-Chip and ChIP-Seq
  • RefSeq ID: NM_003984
  • Location:chr17 23824790-23848513
  • strand:+
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
H3ac HepG2E 23819012 23819446 434 5562
RARA MCF7GSE15244 23811910 23812243 333 12714
RARG MCF7GSE15244 23818936 23819557 621 5544
RARG MCF7GSE15244 23823010 23823438 428 1567
TAF k562GSE8489 23819012 23819446 434 5562
TFAP2C MCF7GSE21234 23822528 23823302 774 1876
hScc1 BcellGSE12603 23820259 23820441 182 4441
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
CTCF G2GSE9613 23850970 23851283 313 2613
CTCF G2GSE9613 23856523 23857346 823 8421
ER MCF7GSE19013 23849031 23849851 820 928
NFkBII GM10847GSE19485 23851417 23852828 1411 3609
NFkBII GM12892GSE19485 23851158 23853213 2055 3672
hScc1 BcellGSE12603 23850091 23851207 1116 2136
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
CTCF CD4GSE12889 23845931 23846278 347 0
CTCF CD4SISSRdata 23845931 23846278 347 0
CTCF JurkatGSE12889 23845882 23846345 463 0
CTCF G2GSE9613 23845861 23846396 535 0
ER Fulvestrant-MCF7GSE14664 23842888 23842924 36 0
FOXA1 MCF7GSE15244 23826037 23827152 1115 0
KLF4 hESGSE17917 23838873 23839039 166 0
Oct1 H2O2-HelaGSE14283 23826697 23826725 28 0
Oct1 HelaGSE14283 23826697 23826725 28 0
Oct1 HelaGSE14283 23842892 23842922 30 0
RARG MCF7GSE15244 23826451 23827192 741 0
TFAP2C MCF7GSE21234 23847488 23848293 805 0
hScc1 BcellGSE12603 23845758 23847086 1328 0
hScc1 BcellGSE12603 23848138 23848382 244 0
hScc1 CdLSGSE12603 23845718 23846430 712 0
hScc1 G2GSE9613 23845758 23846430 672 0
p63 keratinocytesGSE17611 23843129 23844113 984 0
Validated miRNA targets Top
Cis-Nats regulation Top

Simple Query:


  (e.g. CHD8)

Syndromic Genes

Non-syndromic Genes

AutismKB Statistics

  • Studies: 1,036
  • Genes: 1,379
  • CNVs/SVs: 5,420
  • SNVs/Indels: 11,669
  • de novo Mutations: 5,669
  • Mosaics: 789
  • Linkage Regions: 172
  • Paper Collected: 6/30/2018
  • Last Update: 8/26/2018


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