AutismKB 2.0

Annotation Detail for SYT7


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Basic Information Top
Gene Symbol:SYT7 ( IPCA-7,MGC150517,PCANAP7,SYT-VII )
Gene Full Name: synaptotagmin VII
Band: 11q12.2
Quick LinksEntrez ID:9066; OMIM: 604146; Uniprot ID:SYT7_HUMAN; ENSEMBL ID: ENSG00000011347; HGNC ID: 11514
Relate to Another Database: SFARIGene; denovo-db
Post Translation Modification Top
Location(AA) Modification
322Phosphothreonine.
Location(AA) Modifications Resource
Location(AA) Modification Resource
37S-palmitoylHMM predict
40S-palmitoylHMM predict
51Phosphoserine(PKG)HMM predict
88Phosphothreonine(MAPK)HMM predict
97Phosphothreonine(PKC)HMM predict
102Phosphoserine(CK1)HMM predict
118Phosphoserine(ATM)HMM predict
121Phosphoserine(CK2)HMM predict
188Phosphothreonine(PKC)HMM predict
200N-linkedHMM predict
210Phosphotyrosine(Jak)HMM predict
276N-linkedHMM predict
280N-linkedHMM predict
Validated transcription factor binding site by ChIP-Chip and ChIP-Seq
  • RefSeq ID: NM_004200
  • Location:chr11 61039363-61104873
  • strand:-
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
CTCF CD4GSE12889 61105176 61105341 165 385
CTCF CD4SISSRdata 61105176 61105341 165 385
Myc hESGSE17917 61105216 61105591 375 530
NRSF mAbJurkat 61105976 61106955 979 1592
NRSF pAbJurkat 61120129 61120707 578 15545
P300 T0-glioblastomaGSE21026 61105081 61106049 968 692
P300 T30-glioblastomaGSE21026 61105099 61105899 800 626
Rb SenescentGSE19898 61105444 61105600 156 649
TFAP2C MCF7GSE21234 61105346 61106060 714 830
TFAP2C MCF7GSE21234 61114049 61114420 371 9361
TFAP2C MCF7GSE21234 61119202 61120040 838 14748
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
NRSF pAbJurkat 61032492 61032825 333 6705
PAX3-FKHR Rh4GSE19063 61029323 61030511 1188 9447
RARG MCF7GSE15244 61026989 61027482 493 12128
Rb SenescentGSE19898 61033243 61033779 536 5853
Rb shRbSenescenceGSE19898 61033412 61033615 203 5850
TFAP2C MCF7GSE21234 61037006 61038598 1592 1562
p130 shRbSenescentGSE19898 61033501 61033659 158 5784
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
CBP T0-glioblastomaGSE21026 61091274 61091607 333 0
CBP T30-glioblastomaGSE21026 61075430 61076443 1013 0
CBP T30-glioblastomaGSE21026 61091085 61091580 495 0
CTCF CD4GSE12889 61040991 61041254 263 0
CTCF CD4GSE12889 61056229 61056477 248 0
CTCF CD4SISSRdata 61040991 61041254 263 0
CTCF CD4SISSRdata 61056229 61056477 248 0
FOXA1 MCF7GSE15244 61041149 61041698 549 0
FOXA1 MCF7GSE15244 61056290 61056518 228 0
FOXA1 MCF7GSE15244 61062274 61062930 656 0
GATA3 MCF7GSE15244 61056290 61056927 637 0
Myc K562GSE19551 61091178 61091648 470 0
NRSF JurkatGSE13047 61088245 61092315 4070 0
NRSF mAbJurkat 61085171 61087230 2059 0
NRSF mAbJurkat 61087611 61092418 4807 0
NRSF mAbJurkat 61093358 61094421 1063 0
NRSF-mono JurkatQuESTdata 61090883 61092259 1376 0
NRSF pAbJurkat 61049070 61050032 962 0
NRSF pAbJurkat 61060901 61062311 1410 0
NRSF pAbJurkat 61066376 61066758 382 0
NRSF pAbJurkat 61078446 61080556 2110 0
NRSF pAbJurkat 61085244 61087230 1986 0
NRSF pAbJurkat 61089147 61092275 3128 0
NRSF pAbJurkat 61093416 61094363 947 0
NRSF pAbJurkat 61095234 61095935 701 0
NRSF pAbJurkat 61103948 61104509 561 0
NRSF-poly JurkatQuESTdata 61089706 61092255 2549 0
Nanog hESGSE18292 61100452 61100793 341 0
Oct1 HelaGSE14283 61058174 61058237 63 0
Oct1 HelaGSE14283 61086608 61086657 49 0
P300 T0-glioblastomaGSE21026 61067810 61068402 592 0
P300 T30-glioblastomaGSE21026 61067804 61068463 659 0
P300 T30-glioblastomaGSE21026 61075396 61076367 971 0
P300 T30-glioblastomaGSE21026 61090991 61091587 596 0
RARG MCF7GSE15244 61056290 61056582 292 0
RNAII Tamoxifen-MCF7GSE14664 61087217 61087303 86 0
Rb SenescentGSE19898 61091311 61091872 561 0
TFAP2C MCF7GSE21234 61056048 61056603 555 0
hScc1 BcellGSE12603 61041006 61041443 437 0
hScc1 BcellGSE12603 61069688 61070207 519 0
hScc1 BcellGSE12603 61081337 61081662 325 0
hScc1 BcellGSE12603 61093907 61094363 456 0
hScc1 CdLSGSE12603 61040824 61041443 619 0
hScc1 CdLSGSE12603 61066582 61066826 244 0
hScc1 CdLSGSE12603 61104437 61104760 323 0
hScc1 G2GSE9613 61039935 61041375 1440 0
p130 SenescentGSE19898 61091214 61091491 277 0
Validated miRNA targets Top
Cis-Nats regulation Top

Simple Query:


  (e.g. CHD8)

Syndromic Genes

Non-syndromic Genes

AutismKB Statistics

  • Studies: 1,036
  • Genes: 1,379
  • CNVs/SVs: 5,420
  • SNVs/Indels: 11,669
  • de novo Mutations: 5,669
  • Mosaics: 789
  • Linkage Regions: 172
  • Paper Collected: 6/30/2018
  • Last Update: 8/26/2018


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