AutismKB 2.0

Annotation Detail for LRRC16B


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Basic Information Top
Gene Symbol:LRRC16B ( C14orf121,CARMIL3,crml-1 )
Gene Full Name: leucine rich repeat containing 16B
Band: 14q11.2
Quick LinksEntrez ID:90668; OMIM: NA; Uniprot ID:LR16B_HUMAN; ENSEMBL ID: ENSG00000186648; HGNC ID:
Relate to Another Database: SFARIGene; denovo-db
Post Translation Modification Top
Validated transcription factor binding site by ChIP-Chip and ChIP-Seq
  • RefSeq ID: NM_138360
  • Location:chr14 23591045-23608780
  • strand:+
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
CTCF CD4GSE12889 23575808 23576051 243 15116
CTCF CD4SISSRdata 23575808 23576051 243 15116
CTCF G2GSE9613 23573073 23573541 468 17739
CTCF G2GSE9613 23575495 23576974 1479 14811
H3ac HepG2E 23573307 23573719 412 17533
H3ac HepG2E 23574050 23575031 981 16505
H3ac HepG2E 23575495 23576536 1041 15030
H3ac HepG2E 23588173 23588933 760 2493
H3ac HepG2E 23589577 23590680 1103 917
PHF8 293TGSE20725 23575166 23576077 911 15424
RARA MCF7GSE15244 23572112 23572518 406 18731
RARA MCF7GSE15244 23574050 23574985 935 16528
RARA MCF7GSE15244 23576104 23576872 768 14558
RARG MCF7GSE15244 23572112 23572518 406 18731
RARG MCF7GSE15244 23573036 23573719 683 17668
RARG MCF7GSE15244 23574050 23574907 857 16567
RARG MCF7GSE15244 23575952 23577685 1733 14227
TAFII hESGSE17917 23575830 23576034 204 15114
hScc1 BcellGSE12603 23575164 23576386 1222 15271
hScc1 CdLSGSE12603 23575531 23576314 783 15123
No data
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
CTCF CD4GSE12889 23597320 23597641 321 0
CTCF CD4SISSRdata 23597320 23597641 321 0
CTCF JurkatGSE12889 23597450 23597664 214 0
CTCF G2GSE9613 23591113 23592131 1018 0
CTCF G2GSE9613 23593315 23593633 318 0
CTCF G2GSE9613 23597069 23598023 954 0
CTCF G2GSE9613 23598442 23598570 128 0
CTCF G2GSE9613 23599016 23599221 205 0
CTCF G2GSE9613 23603854 23604094 240 0
ER MCF7GSE19013 23600337 23600889 552 0
NRSF JurkatGSE13047 23590646 23593009 2363 0
NRSF mAbJurkat 23591683 23593633 1950 0
NRSF-mono JurkatQuESTdata 23590723 23592193 1470 0
NRSF-poly JurkatQuESTdata 23590552 23592814 2262 0
Oct1 H2O2-HelaGSE14283 23607935 23607968 33 0
Oct1 HelaGSE14283 23607935 23607970 35 0
RARA MCF7GSE15244 23602481 23602833 352 0
RARG MCF7GSE15244 23602548 23602833 285 0
TAFII hESGSE17917 23597270 23597624 354 0
TFAP2C MCF7GSE21234 23602459 23602852 393 0
hScc1 BcellGSE12603 23591247 23591861 614 0
hScc1 BcellGSE12603 23595336 23595789 453 0
hScc1 BcellGSE12603 23596949 23598118 1169 0
hScc1 BcellGSE12603 23603854 23604304 450 0
hScc1 BcellGSE12603 23608040 23608365 325 0
hScc1 CdLSGSE12603 23597069 23597854 785 0
Validated miRNA targets Top
Cis-Nats regulation Top

Simple Query:


  (e.g. CHD8)

Syndromic Genes

Non-syndromic Genes

AutismKB Statistics

  • Studies: 1,036
  • Genes: 1,379
  • CNVs/SVs: 5,420
  • SNVs/Indels: 11,669
  • de novo Mutations: 5,669
  • Mosaics: 789
  • Linkage Regions: 172
  • Paper Collected: 6/30/2018
  • Last Update: 8/26/2018


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