Annotation Detail for CLDN9

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Basic Information Top

Gene Symbol:	CLDN9 ( - )
Gene Full Name:	claudin 9
Band:	16p13.3
Quick Links	Entrez ID:9080; OMIM: NA; Uniprot ID:CLD9_HUMAN; ENSEMBL ID: ENSG00000213937; HGNC ID: 2051
Relate to Another Database:	SFARIGene; denovo-db

Post Translation Modification

Location(AA)	Modification
200	Phosphotyrosine.

Validated transcription factor binding site by ChIP-Chip and ChIP-Seq

Transcrip Factors	Experimental Cell	Database	TF Binding Start	TF Binding End	TF Binding Length	The Distance to Gene
CTCF	CD4	GSE12889	2993682	2994093	411	8319
CTCF	CD4	SISSRdata	2993682	2994093	411	8319
CTCF	Hela	GSE12889	2993776	2994006	230	8316
CTCF	G2	GSE9613	2990986	2991473	487	10977
CTCF	G2	GSE9613	2993839	2994291	452	8142
Fos	K562	GSE19551	2993587	2994440	853	8193
NRSF	pAb	Jurkat	2988460	2989192	732	13381
Oct4	hES	GSE21916	2997650	2999075	1425	3844
P300	T30-glioblastoma	GSE21026	2993515	2994527	1012	8186
Rb	Growing	GSE19898	2993890	2994139	249	8192
Rb	Quiescent	GSE19898	2993905	2994129	224	8190
Rb	Senescent	GSE19898	2993831	2994124	293	8229
Rb	shRbSenescence	GSE19898	2993864	2994133	269	8208
Sox2	hES	GSE18292	2998418	2998617	199	3689
TFAP2C	MCF7	GSE21234	2999553	3000602	1049	2129
hScc1	Bcell	GSE12603	2993839	2994291	452	8142
hScc1	CdLS	GSE12603	2993839	2994180	341	8197
p130	Quiescent	GSE19898	2993792	2994160	368	8231
p130	Senescent	GSE19898	2993895	2994103	208	8208
p130	shRbQuiescent	GSE19898	2993589	2994196	607	8314
p130	shRbSenescent	GSE19898	2993757	2994208	451	8224

Transcrip Factors	Experimental Cell	Database	TF Binding Start	TF Binding End	TF Binding Length
CTCF	G2	GSE9613	3002857	3003276	419
TFAP2C	MCF7	GSE21234	3002706	3003827	1121
hScc1	Bcell	GSE12603	3002587	3003099	512

Validated miRNA targets

Cis-Nats regulation

Simple Query:

Paper Collected: 6/30/2018

Last Update: 8/26/2018