AutismKB 2.0

Annotation Detail for SPOCD1


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Basic Information Top
Gene Symbol:SPOCD1 ( FLJ25348,FLJ39908 )
Gene Full Name: SPOC domain containing 1
Band: 1p35.2
Quick LinksEntrez ID:90853; OMIM: NA; Uniprot ID:SPOC1_HUMAN; ENSEMBL ID: ENSG00000134668; HGNC ID: 26338
Relate to Another Database: SFARIGene; denovo-db
Post Translation Modification Top
No data
No data
Location(AA) Modification Resource
18Phosphoserine(CDC2)HMM predict
46O-linkedHMM predict
115Phosphothreonine(PKC)HMM predict
116Phosphoserine(PKC)HMM predict
183Phosphothreonine(PKC)HMM predict
185Phosphoserine(CK1)HMM predict
196O-linkedHMM predict
197Phosphoserine(CDC2)HMM predict
197Phosphoserine(CDK)HMM predict
260O-linkedHMM predict
266O-linkedHMM predict
274O-linkedHMM predict
287Phosphotyrosine(EGFR)HMM predict
299Phosphoserine(CDC2)HMM predict
299Phosphoserine(IKK)HMM predict
317O-linkedHMM predict
351Phosphoserine(CK1)HMM predict
373MethylarginineHMM predict
442Phosphoserine(CK1)HMM predict
512Phosphoserine(CDC2)HMM predict
514Phosphoserine(CDK)HMM predict
514Phosphoserine(CDC2)HMM predict
539O-linkedHMM predict
562Phosphoserine(IKK)HMM predict
575Phosphoserine(ATM)HMM predict
586Phosphoserine(CK1)HMM predict
586Phosphoserine(IKK)HMM predict
611Phosphothreonine(PKC)HMM predict
633Phosphoserine(CK1)HMM predict
661Phosphothreonine(PKC)HMM predict
697Phosphoserine(PKA)HMM predict
822Phosphoserine(ATM)HMM predict
824O-linkedHMM predict
838Phosphoserine(IKK)HMM predict
940Phosphothreonine(PKA)HMM predict
995Phosphoserine(IKK)HMM predict
995Phosphoserine(MAPK)HMM predict
999Phosphoserine(MAPK)HMM predict
1048Phosphotyrosine(Syk)HMM predict
1048Phosphotyrosine(Jak)HMM predict
1062Phosphothreonine(CDC2)HMM predict
1093MethylarginineHMM predict
1095MethylarginineHMM predict
1124Phosphotyrosine(Abl)HMM predict
1124Phosphotyrosine(SRC)HMM predict
1124Phosphotyrosine(Syk)HMM predict
1125O-linkedHMM predict
1198Phosphoserine(IKK)HMM predict
1210S-farnesylHMM predict
1213ProlineHMM predict
Validated transcription factor binding site by ChIP-Chip and ChIP-Seq
  • RefSeq ID: NM_144569
  • Location:chr1 32028611-32054166
  • strand:-
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
CTCF CD4GSE12889 32054106 32054483 377 128
CTCF CD4SISSRdata 32054106 32054483 377 128
CTCF HelaGSE12889 32054183 32054470 287 160
CTCF JurkatGSE12889 32054109 32054442 333 109
CTCF G2GSE9613 32054076 32054473 397 108
CTCF G2GSE9613 32070226 32070481 255 16187
CTCF G2GSE9613 32072700 32072918 218 18643
ER MCF7GSE19013 32068320 32069380 1060 14684
Fos K562GSE19551 32064912 32065891 979 11235
Gata1 K562GSE18868 32065058 32065748 690 11237
Gata2 K562GSE18868 32064943 32065753 810 11182
Oct1 H2O2-HelaGSE14283 32056771 32056807 36 2623
Oct1 HelaGSE14283 32056770 32056806 36 2622
TFAP2C MCF7GSE21234 32068526 32069332 806 14763
USF1 HepG2E 32056562 32056815 253 2522
VDR GM10855-stimGSE22484 32065050 32066331 1281 11524
VDR GM10861-stimGSE22484 32064872 32066284 1412 11412
hScc1 BcellGSE12603 32053973 32054473 500 57
hScc1 BcellGSE12603 32072700 32072918 218 18643
hScc1 CdLSGSE12603 32054105 32054473 368 123
hScc1 G2GSE9613 32054076 32054473 397 108
p130 SenescentGSE19898 32069635 32069921 286 15612
p130 shRbSenescentGSE19898 32054094 32054473 379 117
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
CTCF CD4GSE12889 32027448 32027717 269 1029
CTCF CD4SISSRdata 32027448 32027717 269 1029
CTCF HelaGSE12889 32027482 32027686 204 1028
CTCF JurkatGSE12889 32027465 32027699 234 1030
CTCF G2GSE9613 32027183 32028042 859 999
Rb GrowingGSE19898 32027492 32027843 351 944
Rb QuiescentGSE19898 32026607 32026733 126 1942
Rb QuiescentGSE19898 32026794 32027011 217 1709
Rb QuiescentGSE19898 32027168 32027541 373 1257
Rb SenescentGSE19898 32027042 32027497 455 1342
SRF GMOGSE8489 32022545 32022688 143 5995
TFAP2C MCF7GSE21234 32020504 32020900 396 7910
TFAP2C MCF7GSE21234 32026286 32027342 1056 1798
hScc1 BcellGSE12603 32027284 32028117 833 911
hScc1 CdLSGSE12603 32027039 32027795 756 1195
hScc1 G2GSE9613 32026899 32028078 1179 1123
p130 QuiescentGSE19898 32026406 32026840 434 1989
p130 SenescentGSE19898 32026312 32026982 670 1965
p130 SenescentGSE19898 32027130 32027802 672 1146
p130 shRbQuiescentGSE19898 32026270 32027433 1163 1760
p130 shRbQuiescentGSE19898 32027530 32027888 358 903
p130 shRbSenescentGSE19898 32026465 32026909 444 1925
p130 shRbSenescentGSE19898 32027119 32027408 289 1348
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
CBP T30-glioblastomaGSE21026 32036423 32037426 1003 0
CTCF G2GSE9613 32030237 32030518 281 0
CTCF G2GSE9613 32033862 32034151 289 0
P300 T30-glioblastomaGSE21026 32036339 32037680 1341 0
TFAP2C MCF7GSE21234 32052388 32052727 339 0
USF1 HepG2E 32051938 32053333 1395 0
USF1 HepG2E 32053779 32054473 694 0
Validated miRNA targets Top
Cis-Nats regulation Top

Simple Query:


  (e.g. CHD8)

Syndromic Genes

Non-syndromic Genes

AutismKB Statistics

  • Studies: 1,036
  • Genes: 1,379
  • CNVs/SVs: 5,420
  • SNVs/Indels: 11,669
  • de novo Mutations: 5,669
  • Mosaics: 789
  • Linkage Regions: 172
  • Paper Collected: 6/30/2018
  • Last Update: 8/26/2018


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