AutismKB 2.0

Annotation Detail for CD1A


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Basic Information Top
Gene Symbol:CD1A ( CD1,FCB6,HTA1,R4,T6 )
Gene Full Name: CD1a molecule
Band: 1q23.1
Quick LinksEntrez ID:909; OMIM: 188370; Uniprot ID:CD1A_HUMAN; ENSEMBL ID: ENSG00000158477; HGNC ID: 1634
Relate to Another Database: SFARIGene; denovo-db
Post Translation Modification Top
Location(AA) Modification
37N-linked (GlcNAc...).
60N-linked (GlcNAc...) (Potential).
74N-linked (GlcNAc...).
145N-linked (GlcNAc...).
Location(AA) Modifications Resource
37N-linked (GlcNAc...).Swiss-Prot 53.0
60N-linked (GlcNAc...) (Potential).Swiss-Prot 53.0
74N-linked (GlcNAc...).Swiss-Prot 53.0
145N-linked (GlcNAc...).Swiss-Prot 53.0
Location(AA) Modification Resource
37N-linkedHMM predict
43N-linkedHMM predict
60N-linkedHMM predict
74N-linkedHMM predict
77N-linkedHMM predict
145N-linkedHMM predict
146N-linkedHMM predict
213Phosphoserine(CDC2)HMM predict
283Phosphoserine(PKG)HMM predict
284Phosphoserine(CK1)HMM predict
Validated transcription factor binding site by ChIP-Chip and ChIP-Seq
  • RefSeq ID: NM_001763
  • Location:chr1 156490550-156494679
  • strand:+
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
CBP T0-glioblastomaGSE21026 156489889 156490491 602 361
ER E2-MCF7GSE14664 156487850 156487914 64 2669
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
Oct1 HelaGSE14283 156497751 156497778 27 3085
Oct1 HelaGSE14283 156509544 156509573 29 14879
hScc1 BcellGSE12603 156503649 156503893 244 9092
No data
Validated miRNA targets Top
Micro RNA Name Stem Loop Name The chromosome that miRNA located Publication
hsa-miR-16 hsa-mir-16-1 13 19784778
hsa-miR-16 hsa-mir-16-2 3 19784778
No data
Cis-Nats regulation Top

Simple Query:


  (e.g. CHD8)

Syndromic Genes

Non-syndromic Genes

AutismKB Statistics

  • Studies: 1,036
  • Genes: 1,379
  • CNVs/SVs: 5,420
  • SNVs/Indels: 11,669
  • de novo Mutations: 5,669
  • Mosaics: 789
  • Linkage Regions: 172
  • Paper Collected: 6/30/2018
  • Last Update: 8/26/2018