AutismKB 2.0

Annotation Detail for USP2


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Basic Information Top
Gene Symbol:USP2 ( UBP41,USP9 )
Gene Full Name: ubiquitin specific peptidase 2
Band: 11q23.3
Quick LinksEntrez ID:9099; OMIM: 604725; Uniprot ID:UBP2_HUMAN; ENSEMBL ID: ENSG00000036672; HGNC ID: 12618
Relate to Another Database: SFARIGene; denovo-db
Post Translation Modification Top
No data
No data
Location(AA) Modification Resource
94Phosphoserine(PKG)HMM predict
108Phosphoserine(ATM)HMM predict
151Phosphoserine(CK1)HMM predict
155Phosphothreonine(PKC)HMM predict
207Phosphoserine(PKG)HMM predict
207Phosphoserine(CAMK2)HMM predict
209Phosphoserine(ATM)HMM predict
213Phosphoserine(ATM)HMM predict
213O-linkedHMM predict
248O-linkedHMM predict
251Phosphoserine(CK1)HMM predict
252PhosphoserineHMM predict
252Phosphoserine(CDC2)HMM predict
377Phosphothreonine(PKC)HMM predict
382Phosphoserine(IKK)HMM predict
403Phosphotyrosine(Jak)HMM predict
430Phosphotyrosine(Jak)HMM predict
450Phosphotyrosine(EGFR)HMM predict
477S-palmitoylHMM predict
490Phosphoserine(PKA)HMM predict
506Phosphoserine(CK1)HMM predict
548N-linkedHMM predict
574N-linkedHMM predict
579Phosphothreonine(CDK)HMM predict
579Phosphothreonine(MAPK)HMM predict
Validated transcription factor binding site by ChIP-Chip and ChIP-Seq
  • RefSeq ID: NM_004205
  • Location:chr11 118732162-118757574
  • strand:-
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
CBP T30-glioblastomaGSE21026 118757250 118758259 1009 180
CTCF CD4GSE12889 118757429 118757748 319 14
CTCF CD4SISSRdata 118757429 118757748 319 14
P300 T30-glioblastomaGSE21026 118757201 118758375 1174 214
RARA MCF7GSE15244 118757468 118757921 453 120
Rb QuiescentGSE19898 118757884 118758023 139 379
TFAP2C MCF7GSE21234 118757497 118757976 479 162
USF1 HepG2E 118757567 118758453 886 436
USF2 HepG2E 118757677 118758061 384 295
p130 QuiescentGSE19898 118757770 118757926 156 274
p130 shRbQuiescentGSE19898 118757710 118758094 384 328
p130 shRbSenescentGSE19898 118757469 118758148 679 234
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
FOXA1 MCF7GSE15244 118731044 118731811 767 735
FoxA1 MCF7MACSdata 118731119 118731349 230 929
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
CTCF JurkatGSE12889 118750117 118750467 350 0
FOXA1 MCF7GSE15244 118756973 118757921 948 0
H3ac HepG2E 118754314 118754780 466 0
H3ac HepG2E 118756644 118757263 619 0
Myc K562GSE19551 118756696 118758085 1389 0
Nanog hESGSE18292 118754422 118754564 142 0
Oct1 H2O2-HelaGSE14283 118749154 118749180 26 0
Oct1 HelaGSE14283 118749153 118749180 27 0
Oct1 HelaGSE14283 118756797 118756869 72 0
RARA MCF7GSE15244 118744097 118744635 538 0
RARA MCF7GSE15244 118746162 118747138 976 0
RARG MCF7GSE15244 118746162 118747538 1376 0
USF1 HepG2E 118743678 118745782 2104 0
hScc1 BcellGSE12603 118732129 118732773 644 0
hScc1 BcellGSE12603 118739927 118740404 477 0
hScc1 BcellGSE12603 118750088 118750595 507 0
hScc1 BcellGSE12603 118757048 118757817 769 0
hScc1 CdLSGSE12603 118731622 118733085 1463 0
hScc1 CdLSGSE12603 118739927 118740341 414 0
hScc1 CdLSGSE12603 118749790 118750697 907 0
hScc1 G2GSE9613 118750052 118750532 480 0
p130 shRbQuiescentGSE19898 118756768 118757270 502 0
Validated miRNA targets Top
Cis-Nats regulation Top
Cluster ID Plue Type Plus Gene Name Plus Chromosome Plus Start Plus End Overlap Length Minus Type Minus Gene Name Minus Chromosome Minus Star Minus End Type
5300 EST chr11 118756661 118757501 109 mRNA USP2 chr11 118732162 118757575Sense/Antisense (SA) pairs

Simple Query:


  (e.g. CHD8)

Syndromic Genes

Non-syndromic Genes

AutismKB Statistics

  • Studies: 1,036
  • Genes: 1,379
  • CNVs/SVs: 5,420
  • SNVs/Indels: 11,669
  • de novo Mutations: 5,669
  • Mosaics: 789
  • Linkage Regions: 172
  • Paper Collected: 6/30/2018
  • Last Update: 8/26/2018


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