AutismKB 2.0

Annotation Detail for CCDC34


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Basic Information Top
Gene Symbol:CCDC34 ( NY-REN-41,RAMA3 )
Gene Full Name: coiled-coil domain containing 34
Band: 11p14.1
Quick LinksEntrez ID:91057; OMIM: 612324; Uniprot ID:CCD34_HUMAN; ENSEMBL ID: ENSG00000109881; HGNC ID: 25079
Relate to Another Database: SFARIGene; denovo-db
Post Translation Modification Top
Validated transcription factor binding site by ChIP-Chip and ChIP-Seq
  • RefSeq ID: NM_080654
  • Location:chr11 27326994-27341370
  • strand:-
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
H3ac HepG2E 27341747 27342180 433 593
LIN9 G0GSE7516 27340764 27342008 1244 16
Rb QuiescentGSE19898 27341505 27341627 122 196
p130 QuiescentGSE19898 27341062 27341706 644 14
No data
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
E2F4 G0GSE7516 27340868 27341573 705 0
E2F4 SGSE7516 27340764 27341498 734 0
FOXA1 MCF7GSE15244 27338628 27338883 255 0
H3K4me3 colorectalcancer 27340376 27340907 531 0
H3ac HepG2E 27338487 27340069 1582 0
H3ac HepG2E 27340376 27341079 703 0
LIN9 SGSE7516 27339741 27340069 328 0
LIN9 SGSE7516 27340513 27341791 1278 0
RARA MCF7GSE15244 27338628 27339129 501 0
RARA MCF7GSE15244 27340376 27340764 388 0
RARG MCF7GSE15244 27338628 27338883 255 0
Rb QuiescentGSE19898 27341212 27341490 278 0
hScc1 BcellGSE12603 27341079 27341326 247 0
hScc1 CdLSGSE12603 27341042 27341421 379 0
p130 SenescentGSE19898 27340946 27341737 791 0
p130 shRbQuiescentGSE19898 27340783 27341853 1070 0
p130 shRbSenescentGSE19898 27340987 27341665 678 0
p130 G0GSE7516 27340764 27341712 948 0
p130 SGSE7516 27340583 27341791 1208 0
Validated miRNA targets Top
Cis-Nats regulation Top

Simple Query:


  (e.g. CHD8)

Syndromic Genes

Non-syndromic Genes

AutismKB Statistics

  • Studies: 1,036
  • Genes: 1,379
  • CNVs/SVs: 5,420
  • SNVs/Indels: 11,669
  • de novo Mutations: 5,669
  • Mosaics: 789
  • Linkage Regions: 172
  • Paper Collected: 6/30/2018
  • Last Update: 8/26/2018