AutismKB 2.0

Annotation Detail for SEC22C


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Basic Information Top
Gene Symbol:SEC22C ( DKFZp761F2321,MGC13261,MGC5373,SEC22L3 )
Gene Full Name: SEC22 vesicle trafficking protein homolog C (S. cerevisiae)
Band: 3p22.1
Quick LinksEntrez ID:9117; OMIM: 604028; Uniprot ID:SC22C_HUMAN; ENSEMBL ID: ENSG00000093183; HGNC ID: 16828
Relate to Another Database: SFARIGene; denovo-db
Post Translation Modification Top
Validated transcription factor binding site by ChIP-Chip and ChIP-Seq
  • RefSeq ID: NM_004206
  • Location:chr3 42564476-42598431
  • strand:-
No data
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
CTCF CD4GSE12889 42563897 42564234 337 411
CTCF CD4SISSRdata 42563897 42564234 337 411
CTCF JurkatGSE12889 42564035 42564327 292 296
CTCF G2GSE9613 42563736 42564449 713 384
FOXA1 MCF7GSE15244 42560909 42561809 900 3118
Rb GrowingGSE19898 42564091 42564302 211 280
Rb QuiescentGSE19898 42561477 42561606 129 2935
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
CTCF G2GSE9613 42565225 42565368 143 0
Validated miRNA targets Top
Cis-Nats regulation Top

Simple Query:


  (e.g. CHD8)

Syndromic Genes

Non-syndromic Genes

AutismKB Statistics

  • Studies: 1,036
  • Genes: 1,379
  • CNVs/SVs: 5,420
  • SNVs/Indels: 11,669
  • de novo Mutations: 5,669
  • Mosaics: 789
  • Linkage Regions: 172
  • Paper Collected: 6/30/2018
  • Last Update: 8/26/2018