AutismKB 2.0

Annotation Detail for XRCC6BP1


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Basic Information Top
Gene Symbol:XRCC6BP1 ( KUB3,MGC134817,MGC134818 )
Gene Full Name: XRCC6 binding protein 1
Band: 12q14.1
Quick LinksEntrez ID:91419; OMIM: NA; Uniprot ID:ATP23_HUMAN; ENSEMBL ID: ENSG00000166896; HGNC ID:
Relate to Another Database: SFARIGene; denovo-db
Post Translation Modification Top
Validated transcription factor binding site by ChIP-Chip and ChIP-Seq
  • RefSeq ID: NM_033276
  • Location:chr12 56621711-56637317
  • strand:+
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
CTCF G2GSE9613 56615964 56616382 418 5539
CTCF G2GSE9613 56621109 56621800 691 257
ETS1 JurkatGSE17954 56615724 56616706 982 5497
NRSF pAbJurkat 56621072 56621680 608 336
Oct1 HelaGSE14283 56610473 56610502 29 11224
Oct4 hESGSE21916 56615970 56616553 583 5450
P300 T30-glioblastomaGSE21026 56615675 56616507 832 5621
PHF8 293TGSE20725 56615949 56616541 592 5467
PolII HeLaGSE12783 56615571 56617134 1563 5359
Rb GrowingGSE19898 56621167 56621463 296 397
Rb QuiescentGSE19898 56621588 56621825 237 5
TAF k562GSE8489 56615175 56616301 1126 5974
TAF k562GSE8489 56620485 56621322 837 808
hScc1 CdLSGSE12603 56621037 56621322 285 532
p130 SenescentGSE19898 56616348 56616496 148 5290
p130 SenescentGSE19898 56621127 56621813 686 242
p130 shRbQuiescentGSE19898 56615791 56616445 654 5594
p130 shRbQuiescentGSE19898 56621241 56621873 632 155
p130 shRbSenescentGSE19898 56615775 56616415 640 5617
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
Oct1 HelaGSE14283 56637365 56637403 38 67
Oct1 HelaGSE14283 56646469 56646503 34 9169
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
H3ac HepG2E 56622078 56622437 359 0
PHF8 293TGSE20725 56621076 56622374 1298 0
RARA MCF7GSE15244 56622114 56622437 323 0
TAF HelaGSE8489 56621746 56622437 691 0
TAF HelaGSE8489 56622873 56623189 316 0
TAF k562GSE8489 56621746 56622437 691 0
Validated miRNA targets Top
Cis-Nats regulation Top

Simple Query:


  (e.g. CHD8)

Syndromic Genes

Non-syndromic Genes

AutismKB Statistics

  • Studies: 1,036
  • Genes: 1,379
  • CNVs/SVs: 5,420
  • SNVs/Indels: 11,669
  • de novo Mutations: 5,669
  • Mosaics: 789
  • Linkage Regions: 172
  • Paper Collected: 6/30/2018
  • Last Update: 8/26/2018