AutismKB 2.0

Annotation Detail for SLC6A5


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Basic Information Top
Gene Symbol:SLC6A5 ( GLYT-2,GLYT2,NET1 )
Gene Full Name: solute carrier family 6 (neurotransmitter transporter, glycine), member 5
Band: 11p15.1
Quick LinksEntrez ID:9152; OMIM: 604159; Uniprot ID:SC6A5_HUMAN; ENSEMBL ID: ENSG00000165970; HGNC ID: 11051
Relate to Another Database: SFARIGene; denovo-db
Post Translation Modification Top
Location(AA) Modification
343N-linked (GlcNAc...) (Potential).
353N-linked (GlcNAc...) (Potential).
358N-linked (GlcNAc...) (Potential).
364N-linked (GlcNAc...) (Potential).
Location(AA) Modifications Resource
343N-linked (GlcNAc...) (Potential).Swiss-Prot 53.0
353N-linked (GlcNAc...) (Potential).Swiss-Prot 53.0
358N-linked (GlcNAc...) (Potential).Swiss-Prot 53.0
364N-linked (GlcNAc...) (Potential).Swiss-Prot 53.0
Location(AA) Modification Resource
54O-linkedHMM predict
56Phosphoserine(IKK)HMM predict
56Phosphoserine(PKB)HMM predict
106O-linkedHMM predict
111O-linkedHMM predict
112O-linkedHMM predict
144N-linkedHMM predict
145N-linkedHMM predict
153N-linkedHMM predict
343N-linkedHMM predict
353N-linkedHMM predict
355O-linkedHMM predict
358N-linkedHMM predict
364N-linkedHMM predict
477Phosphoserine(CDK)HMM predict
508O-linkedHMM predict
512O-linkedHMM predict
609S-palmitoylHMM predict
610S-palmitoylHMM predict
687O-linkedHMM predict
705Phosphotyrosine(SRC)HMM predict
770Phosphotyrosine(INSR)HMM predict
Validated transcription factor binding site by ChIP-Chip and ChIP-Seq
  • RefSeq ID: NM_004211
  • Location:chr11 20577521-20633183
  • strand:+
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
H3K27me3 colorectalcancer 20574090 20574975 885 2989
NRSF pAbJurkat 20575618 20576016 398 1705
No data
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
CTCF CD4GSE12889 20588293 20588524 231 0
CTCF CD4GSE12889 20626084 20626353 269 0
CTCF CD4SISSRdata 20588293 20588524 231 0
CTCF CD4SISSRdata 20626084 20626353 269 0
ER E2-MCF7GSE14664 20589815 20589897 82 0
ER E2-MCF7GSE14664 20590386 20590424 38 0
FOXA1 DLD1GSE12801 20609550 20610094 544 0
H3K27me3 colorectalcancer 20576284 20579733 3449 0
H3K27me3 colorectalcancer 20580046 20581488 1442 0
Myc K562GSE19551 20626074 20626411 337 0
NRSF JurkatGSE13047 20577408 20578451 1043 0
NRSF JurkatGSE13047 20579264 20580073 809 0
NRSF mAbJurkat 20575836 20582225 6389 0
NRSF-mono JurkatQuESTdata 20577329 20578444 1115 0
NRSF pAbJurkat 20577160 20578945 1785 0
NRSF pAbJurkat 20581279 20582116 837 0
NRSF-poly JurkatQuESTdata 20577187 20578465 1278 0
Oct1 H2O2-HelaGSE14283 20628231 20628261 30 0
Oct1 HelaGSE14283 20589817 20589898 81 0
Oct1 HelaGSE14283 20590387 20590423 36 0
Oct1 HelaGSE14283 20594127 20594172 45 0
Oct1 HelaGSE14283 20618904 20618941 37 0
Oct1 HelaGSE14283 20623586 20623626 40 0
Oct1 HelaGSE14283 20628220 20628260 40 0
hScc1 BcellGSE12603 20579191 20579609 418 0
hScc1 BcellGSE12603 20588125 20588769 644 0
hScc1 BcellGSE12603 20625984 20626535 551 0
hScc1 CdLSGSE12603 20587974 20588837 863 0
hScc1 CdLSGSE12603 20625984 20626606 622 0
hScc1 G2GSE9613 20588052 20588803 751 0
hScc1 G2GSE9613 20626020 20626606 586 0
Validated miRNA targets Top
Cis-Nats regulation Top

Simple Query:


  (e.g. CHD8)

Syndromic Genes

Non-syndromic Genes

AutismKB Statistics

  • Studies: 1,036
  • Genes: 1,379
  • CNVs/SVs: 5,420
  • SNVs/Indels: 11,669
  • de novo Mutations: 5,669
  • Mosaics: 789
  • Linkage Regions: 172
  • Paper Collected: 6/30/2018
  • Last Update: 8/26/2018


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