Annotation Detail for SLC28A1
Basic Information Top
| Gene Symbol: | SLC28A1 ( CNT1,HCNT1 ) |
|---|---|
| Gene Full Name: | solute carrier family 28 (sodium-coupled nucleoside transporter), member 1 |
| Band: | 15q25.3 |
| Quick Links | Entrez ID:9154; OMIM: 606207; Uniprot ID:S28A1_HUMAN; ENSEMBL ID: ENSG00000156222; HGNC ID: 11001 |
| Relate to Another Database: | SFARIGene; denovo-db |
| No data |
| No data |
| Location(AA) | Modification | Resource |
|---|---|---|
| 11 | Phosphoserine(IKK) | HMM predict |
| 11 | Phosphoserine(PKG) | HMM predict |
| 15 | Phosphothreonine | HMM predict |
| 40 | Phosphoserine(ATM) | HMM predict |
| 43 | Phosphoserine(ATM) | HMM predict |
| 52 | Phosphoserine(IKK) | HMM predict |
| 173 | Phosphoserine(ATM) | HMM predict |
| 543 | N-linked | HMM predict |
| 556 | Phosphoserine(MAPK) | HMM predict |
| 605 | N-linked | HMM predict |
| 611 | Phosphoserine(CK2) | HMM predict |
| 643 | N-linked | HMM predict |
| 647 | Cysteine | HMM predict |
- RefSeq ID: NM_004213
- Location:chr15 83228916-83290029
- strand:+
| No data |
| Transcrip Factors | Experimental Cell | Database | TF Binding Start | TF Binding End | TF Binding Length | The Distance to Gene |
|---|---|---|---|---|---|---|
| CTCF | CD4 | GSE12889 | 83299657 | 83299846 | 189 | 9722 |
| CTCF | CD4 | SISSRdata | 83299657 | 83299846 | 189 | 9722 |
| CTCF | Jurkat | GSE12889 | 83299676 | 83299886 | 210 | 9752 |
| CTCF | G2 | GSE9613 | 83299591 | 83299954 | 363 | 9743 |
| ER | E2-MCF7 | GSE14664 | 83294843 | 83294876 | 33 | 4830 |
| ER | E2-MCF7 | GSE14664 | 83296287 | 83296324 | 37 | 6276 |
| Oct1 | Hela | GSE14283 | 83296294 | 83296332 | 38 | 6284 |
| TFAP2C | MCF7 | GSE21234 | 83306922 | 83308070 | 1148 | 17467 |
| hScc1 | Bcell | GSE12603 | 83299591 | 83299918 | 327 | 9725 |
| hScc1 | CdLS | GSE12603 | 83299591 | 83299983 | 392 | 9758 |
| Transcrip Factors | Experimental Cell | Database | TF Binding Start | TF Binding End | TF Binding Length | The Distance to Gene |
|---|---|---|---|---|---|---|
| CTCF | CD4 | GSE12889 | 83272449 | 83272750 | 301 | 0 |
| CTCF | CD4 | SISSRdata | 83272449 | 83272750 | 301 | 0 |
| CTCF | G2 | GSE9613 | 83262309 | 83262843 | 534 | 0 |
| CTCF | G2 | GSE9613 | 83272299 | 83272729 | 430 | 0 |
| CTCF | G2 | GSE9613 | 83279192 | 83279759 | 567 | 0 |
| CTCF | G2 | GSE9613 | 83288600 | 83288855 | 255 | 0 |
| ER | E2-MCF7 | GSE14664 | 83274857 | 83274890 | 33 | 0 |
| ER | MCF7 | GSE19013 | 83252769 | 83253361 | 592 | 0 |
| FoxA1 | MCF7 | MACSdata | 83274231 | 83274505 | 274 | 0 |
| KLF4 | hES | GSE17917 | 83272216 | 83272374 | 158 | 0 |
| Myc | K562 | GSE19551 | 83259204 | 83259617 | 413 | 0 |
| Myc | K562 | GSE19551 | 83272343 | 83272769 | 426 | 0 |
| Oct1 | Hela | GSE14283 | 83274857 | 83274886 | 29 | 0 |
| P300 | T30-glioblastoma | GSE21026 | 83274095 | 83274857 | 762 | 0 |
| RARA | MCF7 | GSE15244 | 83274091 | 83274822 | 731 | 0 |
| TFAP2C | MCF7 | GSE21234 | 83258531 | 83259786 | 1255 | 0 |
| TFAP2C | MCF7 | GSE21234 | 83273894 | 83274691 | 797 | 0 |
| hScc1 | Bcell | GSE12603 | 83255229 | 83255474 | 245 | 0 |
| hScc1 | Bcell | GSE12603 | 83261363 | 83261658 | 295 | 0 |
| hScc1 | Bcell | GSE12603 | 83270963 | 83271146 | 183 | 0 |
| hScc1 | Bcell | GSE12603 | 83272150 | 83272729 | 579 | 0 |
| hScc1 | CdLS | GSE12603 | 83272079 | 83272729 | 650 | 0 |
| hScc1 | G2 | GSE9613 | 83272079 | 83272729 | 650 | 0 |
| p130 | Quiescent | GSE19898 | 83272164 | 83272681 | 517 | 0 |
| p130 | Senescent | GSE19898 | 83272064 | 83272731 | 667 | 0 |
| p130 | shRbQuiescent | GSE19898 | 83272168 | 83272702 | 534 | 0 |
| p130 | shRbSenescent | GSE19898 | 83272198 | 83272612 | 414 | 0 |
Validated miRNA targets