AutismKB 2.0

Annotation Detail for C12orf65


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Basic Information Top
Gene Symbol:C12orf65 ( FLJ38663 )
Gene Full Name: chromosome 12 open reading frame 65
Band: 12q24.31
Quick LinksEntrez ID:91574; OMIM: 613541; Uniprot ID:CL065_HUMAN; ENSEMBL ID: ENSG00000130921; HGNC ID: 26784
Relate to Another Database: SFARIGene; denovo-db
Post Translation Modification Top
Validated transcription factor binding site by ChIP-Chip and ChIP-Seq
  • RefSeq ID: NM_152269
  • Location:chr12 122283415-122308458
  • strand:+
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
CTCF G2GSE9613 122282035 122282407 372 1195
H3K4me2 HCT116GSE10453 122282301 122282789 488 871
H3K4me3 colorectalcancer 122282479 122283020 541 666
H3ac HepG2E 122282265 122283125 860 721
No data
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
CTCF CD4GSE12889 122288698 122288877 179 0
CTCF CD4SISSRdata 122288698 122288877 179 0
CTCF JurkatGSE12889 122288694 122288896 202 0
CTCF G2GSE9613 122283163 122284370 1207 0
CTCF G2GSE9613 122288698 122288952 254 0
CTCF G2GSE9613 122304065 122304718 653 0
FOXA1 MCF7GSE15244 122283404 122284438 1034 0
Gata1 K562GSE18868 122283477 122284533 1056 0
Gata2 K562GSE18868 122283308 122284688 1380 0
H3K4me3 colorectalcancer 122284124 122284846 722 0
H3ac HepG2E 122283936 122284846 910 0
H3ac HepG2E 122285452 122285838 386 0
P300 T30-glioblastomaGSE21026 122282905 122284513 1608 0
PHF8 293TGSE20725 122282947 122284664 1717 0
PHF8 HeLaGSE20725 122282952 122284383 1431 0
PHF8 Hs68minusFBSGSE20725 122282912 122284835 1923 0
PHF8 Hs68plusFBSGSE20725 122282689 122284817 2128 0
Pol2 GM12878GSE19551 122283114 122284500 1386 0
RARG MCF7GSE15244 122284010 122284786 776 0
RARG MCF7GSE15244 122303890 122304391 501 0
Rb GrowingGSE19898 122283506 122283748 242 0
Rb QuiescentGSE19898 122283232 122283784 552 0
Rb SenescentGSE19898 122283344 122284053 709 0
Rb shRbQuiescentGSE19898 122283589 122283816 227 0
Sox2 hESGSE18292 122288744 122288979 235 0
hScc1 BcellGSE12603 122284010 122284370 360 0
hScc1 BcellGSE12603 122288698 122288952 254 0
hScc1 CdLSGSE12603 122288698 122288952 254 0
hScc1 G2GSE9613 122288698 122288952 254 0
p130 QuiescentGSE19898 122283311 122284065 754 0
p130 SenescentGSE19898 122283090 122283930 840 0
p130 shRbQuiescentGSE19898 122283402 122284104 702 0
p130 shRbSenescentGSE19898 122283286 122283915 629 0
p63 keratinocytesGSE17611 122289172 122290064 892 0
Validated miRNA targets Top
Cis-Nats regulation Top
Cluster ID Plue Type Plus Gene Name Plus Chromosome Plus Start Plus End Overlap Length Minus Type Minus Gene Name Minus Chromosome Minus Star Minus End Type
6755 mRNA FLJ38663 chr12 122242342 122267386 37 mRNA MPHOSPH9 chr12 122165936 122242538Sense/Antisense (SA) pairs

Simple Query:


  (e.g. CHD8)

Syndromic Genes

Non-syndromic Genes

AutismKB Statistics

  • Studies: 1,036
  • Genes: 1,379
  • CNVs/SVs: 5,420
  • SNVs/Indels: 11,669
  • de novo Mutations: 5,669
  • Mosaics: 789
  • Linkage Regions: 172
  • Paper Collected: 6/30/2018
  • Last Update: 8/26/2018


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