Annotation Detail for LONRF1
Basic Information Top
| Gene Symbol: | LONRF1 ( FLJ23749,RNF191 ) |
|---|---|
| Gene Full Name: | LON peptidase N-terminal domain and ring finger 1 |
| Band: | 8p23.1 |
| Quick Links | Entrez ID:91694; OMIM: NA; Uniprot ID:LONF1_HUMAN; ENSEMBL ID: ENSG00000154359; HGNC ID: 26302 |
| Relate to Another Database: | SFARIGene; denovo-db |
| No data |
| No data |
| Location(AA) | Modification | Resource |
|---|---|---|
| 1 | Acetylmethionine | HMM predict |
| 6 | Phosphoserine(IKK) | HMM predict |
| 6 | Phosphoserine(CK1) | HMM predict |
| 38 | Phosphoserine(IKK) | HMM predict |
| 40 | N-linked | HMM predict |
| 55 | Phosphoserine(PKA) | HMM predict |
| 74 | Phosphoserine(CK1) | HMM predict |
| 74 | Phosphoserine(PKG) | HMM predict |
| 96 | Phosphothreonine(MAPK) | HMM predict |
| 162 | Phosphoserine(PKG) | HMM predict |
| 197 | Phosphotyrosine(EGFR) | HMM predict |
| 217 | O-linked | HMM predict |
| 263 | Phosphotyrosine(INSR) | HMM predict |
| 280 | Phosphoserine(IKK) | HMM predict |
| 400 | Leucine | HMM predict |
| 408 | Threonine | HMM predict |
- RefSeq ID: NM_152271
- Location:chr8 12623776-12657362
- strand:-
| Transcrip Factors | Experimental Cell | Database | TF Binding Start | TF Binding End | TF Binding Length | The Distance to Gene |
|---|---|---|---|---|---|---|
| ER | E2-MCF7 | GSE14664 | 12659209 | 12659244 | 35 | 1864 |
| Oct1 | H2O2-Hela | GSE14283 | 12673477 | 12673510 | 33 | 16131 |
| Oct1 | Hela | GSE14283 | 12659210 | 12659249 | 39 | 1867 |
| Oct1 | Hela | GSE14283 | 12660188 | 12660228 | 40 | 2846 |
| P300 | T30-glioblastoma | GSE21026 | 12668198 | 12669103 | 905 | 11288 |
| Rb | Growing | GSE19898 | 12657864 | 12658188 | 324 | 664 |
| No data |
| Transcrip Factors | Experimental Cell | Database | TF Binding Start | TF Binding End | TF Binding Length | The Distance to Gene |
|---|---|---|---|---|---|---|
| CTCF | G2 | GSE9613 | 12655851 | 12657599 | 1748 | 0 |
| Fos | K562 | GSE19551 | 12628428 | 12628857 | 429 | 0 |
| H3ac | HepG2 | E | 12654620 | 12655977 | 1357 | 0 |
| P300 | T0-glioblastoma | GSE21026 | 12627852 | 12629148 | 1296 | 0 |
| P300 | T30-glioblastoma | GSE21026 | 12627775 | 12628963 | 1188 | 0 |
| PHF8 | 293T | GSE20725 | 12656854 | 12657767 | 913 | 0 |
| PHF8 | Hs68minusFBS | GSE20725 | 12655624 | 12656738 | 1114 | 0 |
| Rb | Quiescent | GSE19898 | 12655842 | 12656087 | 245 | 0 |
| TFAP2C | MCF7 | GSE21234 | 12628187 | 12628650 | 463 | 0 |
| hScc1 | Bcell | GSE12603 | 12655555 | 12657918 | 2363 | 0 |
| hScc1 | CdLS | GSE12603 | 12655815 | 12657272 | 1457 | 0 |
| hScc1 | G2 | GSE9613 | 12656024 | 12657827 | 1803 | 0 |
| p130 | Quiescent | GSE19898 | 12655986 | 12656198 | 212 | 0 |
| p130 | shRbQuiescent | GSE19898 | 12655734 | 12656203 | 469 | 0 |
| p130 | shRbSenescent | GSE19898 | 12656030 | 12656319 | 289 | 0 |
Validated miRNA targets| Cluster ID | Plue Type | Plus Gene Name | Plus Chromosome | Plus Start | Plus End | Overlap Length | Minus Type | Minus Gene Name | Minus Chromosome | Minus Star | Minus End | Type |
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 25089 | EST | chr8 | 12630808 | 12632828 | 85 | mRNA | FLJ23749 | chr8 | 12623786 | 12640008 | Sense/Antisense (SA) pairs | |