AutismKB 2.0

Annotation Detail for SLC24A1


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Basic Information Top
Gene Symbol:SLC24A1 ( HsT17412,KIAA0702,NCKX,NCKX1,RODX )
Gene Full Name: solute carrier family 24 (sodium/potassium/calcium exchanger), member 1
Band: 15q22.31
Quick LinksEntrez ID:9187; OMIM: 603617; Uniprot ID:NCKX1_HUMAN; ENSEMBL ID: ENSG00000074621; HGNC ID: 10975
Relate to Another Database: SFARIGene; denovo-db
Post Translation Modification Top
Location(AA) Modification
290N-linked (GlcNAc...) (Potential).
658Phosphoserine (Potential).
Location(AA) Modifications Resource
290N-linked (GlcNAc...) (Potential).Swiss-Prot 53.0
658Phosphoserine (Potential).Swiss-Prot 53.0
Location(AA) Modification Resource
68Phosphoserine(CK1)HMM predict
68Phosphoserine(IKK)HMM predict
68Phosphoserine(PKG)HMM predict
78Phosphoserine(CDC2)HMM predict
78Phosphoserine(ATM)HMM predict
78Phosphoserine(CDK)HMM predict
80Phosphoserine(IKK)HMM predict
80Phosphoserine(CK1)HMM predict
129N-linkedHMM predict
130Phosphotyrosine(INSR)HMM predict
131O-linkedHMM predict
137Phosphothreonine(PKC)HMM predict
144Phosphothreonine(MAPK)HMM predict
146Phosphothreonine(MAPK)HMM predict
167Phosphothreonine(MAPK)HMM predict
169Phosphothreonine(MAPK)HMM predict
178Phosphoserine(IKK)HMM predict
189Phosphothreonine(MAPK)HMM predict
191Phosphoserine(CDC2)HMM predict
191Phosphoserine(CDK)HMM predict
193MethylarginineHMM predict
215Phosphothreonine(MAPK)HMM predict
215Phosphothreonine(CDK)HMM predict
219Phosphothreonine(PKC)HMM predict
271Phosphoserine(MAPK)HMM predict
271Phosphoserine(CDC2)HMM predict
290N-linkedHMM predict
306Phosphothreonine(CDC2)HMM predict
306Phosphothreonine(MAPK)HMM predict
306Phosphothreonine(CDK)HMM predict
326O-linkedHMM predict
327O-linkedHMM predict
332Phosphoserine(IKK)HMM predict
332Phosphoserine(CDC2)HMM predict
332O-linkedHMM predict
347N-linkedHMM predict
349Phosphoserine(CDC2)HMM predict
376O-linkedHMM predict
376O-linkedHMM predict
377O-linkedHMM predict
378O-linkedHMM predict
379O-linkedHMM predict
380Phosphothreonine(MAPK)HMM predict
380O-linkedHMM predict
382O-linkedHMM predict
400Phosphothreonine(PKA)HMM predict
406O-linkedHMM predict
406Phosphothreonine(MAPK)HMM predict
406O-linkedHMM predict
406O-linkedHMM predict
408Phosphoserine(CDK)HMM predict
408Phosphoserine(CDC2)HMM predict
408O-linkedHMM predict
410O-linkedHMM predict
412O-linkedHMM predict
412O-linkedHMM predict
421PhosphoserineHMM predict
423Phosphoserine(CDC2)HMM predict
423O-linkedHMM predict
423Phosphoserine(MAPK)HMM predict
423PhosphoserineHMM predict
423Phosphoserine(ATM)HMM predict
425O-linkedHMM predict
425Phosphoserine(ATM)HMM predict
552N-linkedHMM predict
629Phosphoserine(CK1)HMM predict
657Phosphoserine(CK2)HMM predict
660O-linkedHMM predict
661Phosphoserine(IKK)HMM predict
661Phosphoserine(CK1)HMM predict
664N-linkedHMM predict
695Phosphoserine(CK1)HMM predict
710Phosphoserine(CK1)HMM predict
710Phosphoserine(CK2)HMM predict
724O-linkedHMM predict
726O-linkedHMM predict
726O-linkedHMM predict
726Phosphothreonine(MAPK)HMM predict
830Phosphoserine(ATM)HMM predict
859Phosphoserine(CK2)HMM predict
859Phosphoserine(CK2)HMM predict
1006Phosphoserine(IKK)HMM predict
1094Phosphoserine(PKB)HMM predict
Validated transcription factor binding site by ChIP-Chip and ChIP-Seq
  • RefSeq ID: NM_004727
  • Location:chr15 63701322-63735650
  • strand:+
No data
No data
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
CTCF CD4GSE12889 63718048 63718295 247 0
CTCF CD4SISSRdata 63718048 63718295 247 0
CTCF G2GSE9613 63717934 63718927 993 0
Sox2 hESGSE18292 63718106 63718261 155 0
hScc1 BcellGSE12603 63717934 63718275 341 0
hScc1 CdLSGSE12603 63717643 63718637 994 0
Validated miRNA targets Top
Cis-Nats regulation Top
Cluster ID Plue Type Plus Gene Name Plus Chromosome Plus Start Plus End Overlap Length Minus Type Minus Gene Name Minus Chromosome Minus Star Minus End Type
8960 mRNA SLC24A1 chr15 63701322 63735260 60 EST chr15 63700184 63730357Sense/Antisense (SA) pairs

Simple Query:


  (e.g. CHD8)

Syndromic Genes

Non-syndromic Genes

AutismKB Statistics

  • Studies: 1,036
  • Genes: 1,379
  • CNVs/SVs: 5,420
  • SNVs/Indels: 11,669
  • de novo Mutations: 5,669
  • Mosaics: 789
  • Linkage Regions: 172
  • Paper Collected: 6/30/2018
  • Last Update: 8/26/2018


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