AutismKB 2.0

Annotation Detail for GCNT3


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Basic Information Top
Gene Symbol:GCNT3 ( C2/4GnT,C24GNT,C2GNT2,C2GNTM,GNTM )
Gene Full Name: glucosaminyl (N-acetyl) transferase 3, mucin type
Band: 15q22.2
Quick LinksEntrez ID:9245; OMIM: 606836; Uniprot ID:GCNT3_HUMAN; ENSEMBL ID: ENSG00000140297; HGNC ID: 4205
Relate to Another Database: SFARIGene; denovo-db
Post Translation Modification Top
Location(AA) Modification
289N-linked (GlcNAc...) (Potential).
Location(AA) Modifications Resource
289N-linked (GlcNAc...) (Potential).Swiss-Prot 53.0
Location(AA) Modification Resource
47Phosphoserine(PKG)HMM predict
47Phosphoserine(CK1)HMM predict
69N-linkedHMM predict
103Phosphotyrosine(Jak)HMM predict
289N-linkedHMM predict
298Phosphotyrosine(INSR)HMM predict
327Phosphoserine(ATM)HMM predict
Validated transcription factor binding site by ChIP-Chip and ChIP-Seq
  • RefSeq ID: NM_004751
  • Location:chr15 57696079-57699493
  • strand:+
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
ER MCF7GSE19013 57689718 57690299 581 6071
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
CTCF CD4GSE12889 57701890 57702069 179 2486
CTCF CD4SISSRdata 57701890 57702069 179 2486
hScc1 BcellGSE12603 57701835 57702249 414 2549
hScc1 CdLSGSE12603 57701835 57702321 486 2585
No data
Validated miRNA targets Top
Cis-Nats regulation Top

Simple Query:


  (e.g. CHD8)

Syndromic Genes

Non-syndromic Genes

AutismKB Statistics

  • Studies: 1,036
  • Genes: 1,379
  • CNVs/SVs: 5,420
  • SNVs/Indels: 11,669
  • de novo Mutations: 5,669
  • Mosaics: 789
  • Linkage Regions: 172
  • Paper Collected: 6/30/2018
  • Last Update: 8/26/2018