Annotation Detail for ATP6V1F

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Basic Information Top

Gene Symbol:	ATP6V1F ( ATP6S14,MGC117321,MGC126037,MGC126038,VATF,Vma7 )
Gene Full Name:	ATPase, H+ transporting, lysosomal 14kDa, V1 subunit F
Band:	7q32.1
Quick Links	Entrez ID:9296; OMIM: 607160; Uniprot ID:VATF_HUMAN; ENSEMBL ID: ENSG00000128524; HGNC ID: 16832
Relate to Another Database:	SFARIGene; denovo-db

Post Translation Modification

No data

Validated transcription factor binding site by ChIP-Chip and ChIP-Seq

Transcrip Factors	Experimental Cell	Database	TF Binding Start	TF Binding End	TF Binding Length	The Distance to Gene
ETS1	Jurkat	GSE17954	128289442	128290670	1228	78
PHF8	293T	GSE20725	128289442	128290544	1102	141
Rb	Growing	GSE19898	128289770	128290142	372	178
p130	shRbSenescent	GSE19898	128289762	128290284	522	111

Transcrip Factors	Experimental Cell	Database	TF Binding Start	TF Binding End	TF Binding Length	The Distance to Gene
CTCF	CD4	GSE12889	128310980	128311200	220	17953
CTCF	CD4	SISSRdata	128310980	128311200	220	17953
CTCF	G2	GSE9613	128293272	128293978	706	488
CTCF	G2	GSE9613	128296062	128297537	1475	3662
CTCF	G2	GSE9613	128301526	128301805	279	8528
CTCF	G2	GSE9613	128304749	128305105	356	11790
CTCF	G2	GSE9613	128306733	128307761	1028	14110
CTCF	G2	GSE9613	128308175	128308545	370	15223
CTCF	G2	GSE9613	128310743	128311592	849	18030
CTCF	G2	GSE9613	128312394	128312818	424	19469
NRSF	pAb	Jurkat	128304716	128305105	389	11773
Oct1	Hela	GSE14283	128301771	128301851	80	8674
hScc1	Bcell	GSE12603	128296519	128297279	760	3762
hScc1	Bcell	GSE12603	128306898	128307605	707	14114
hScc1	Bcell	GSE12603	128310743	128311239	496	17854
hScc1	Bcell	GSE12603	128312624	128312854	230	19602
hScc1	CdLS	GSE12603	128310743	128311277	534	17873
hScc1	G2	GSE9613	128306733	128307797	1064	14128
hScc1	G2	GSE9613	128310743	128311344	601	17906

Transcrip Factors	Experimental Cell	Database	TF Binding Start	TF Binding End	TF Binding Length
CTCF	G2	GSE9613	128290039	128290319	280
CTCF	G2	GSE9613	128290881	128291043	162
P300	T0-glioblastoma	GSE21026	128289723	128290797	1074
hScc1	Bcell	GSE12603	128290001	128290362	361
hScc1	Bcell	GSE12603	128290881	128291217	336
p130	Senescent	GSE19898	128289868	128290610	742

Validated miRNA targets

Micro RNA Name	Stem Loop Name	The chromosome that miRNA located	Publication
hsa-let-7b	hsa-let-7b	22	18668040
hsa-let-7b*	hsa-let-7b	22	18668040
hsa-miR-1	hsa-mir-1-2	18	18668040
hsa-miR-1	hsa-mir-1-1	20	18668040
hsa-miR-155	hsa-mir-155	21	18668040
hsa-miR-155*	hsa-mir-155	21	18668040
hsa-miR-16	hsa-mir-16-1	13	18668040
hsa-miR-16	hsa-mir-16-2	3	18668040
hsa-miR-30a	hsa-mir-30a	6	18668040
hsa-miR-30a*	hsa-mir-30a	6	18668040
hsa-miR-30b	hsa-mir-30b	8	18668040
hsa-miR-30b*	hsa-mir-30b	8	18668040
hsa-miR-30c	hsa-mir-30c-2	6	18668040
hsa-miR-30c	hsa-mir-30c-1	1	18668040
hsa-miR-30c-1*	hsa-mir-30c-1	1	18668040
hsa-miR-30c-2*	hsa-mir-30c-2	6	18668040
hsa-miR-30d	hsa-mir-30d	8	18668040
hsa-miR-30d*	hsa-mir-30d	8	18668040
hsa-miR-30e	hsa-mir-30e	1	18668040
hsa-miR-30e*	hsa-mir-30e	1	18668040

ID in Tarbase	Data Type	Support Type	miRNA	Gene	Direct Support	Publication
835	Unknown	pSILAC	let-7b	ATP6V1F	down 50-25%	18668040
Ensembl	Protein Type	Differentially expressed in	Pathology or Event	Mis Regulation	Gene Expression	Tumour Involvement
ENSG00000128524		n_a	n_a	n_a	"squamous cell, leukocyte, lymphocyte, macrophage"	"benign tumour, malignant tumour, carcinoma, leukaemia, non-Hodgkin's, sarcoma"

Cis-Nats regulation

Cluster ID	Plue Type	Plus Gene Name	Plus Chromosome	Plus Start	Plus End	Overlap Length	Minus Type	Minus Gene Name	Minus Chromosome	Minus Star	Minus End	Type
24623	mRNA	ATP6V1F	chr7	128096848	128099853	170	mRNA		chr7	128096455	128114928	Sense/Antisense (SA) pairs

Simple Query:

Paper Collected: 6/30/2018

Last Update: 8/26/2018