AutismKB 2.0

Annotation Detail for COPS2


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Basic Information Top
Gene Symbol:COPS2 ( ALIEN,CSN2,SGN2,TRIP15 )
Gene Full Name: COP9 constitutive photomorphogenic homolog subunit 2 (Arabidopsis)
Band: 15q21.2
Quick LinksEntrez ID:9318; OMIM: 604508; Uniprot ID:CSN2_HUMAN; ENSEMBL ID: ENSG00000166200; HGNC ID: 30747
Relate to Another Database: SFARIGene; denovo-db
Post Translation Modification Top
No data
No data
Location(AA) Modification Resource
16SulfotyrosineHMM predict
16Phosphotyrosine(Syk)HMM predict
16Phosphotyrosine(INSR)HMM predict
20SulfotyrosineHMM predict
21Phosphoserine(CK1)HMM predict
26Phosphoserine(CK1)HMM predict
36Phosphotyrosine(Syk)HMM predict
36Phosphotyrosine(Jak)HMM predict
64O-linkedHMM predict
106N-linkedHMM predict
108Phosphoserine(CAMK2)HMM predict
108Phosphoserine(PKC)HMM predict
132Phosphotyrosine(Syk)HMM predict
165Phosphotyrosine(INSR)HMM predict
181Phosphothreonine(CK2)HMM predict
263MethyllysineHMM predict
270Phosphoserine(CDC2)HMM predict
270Phosphoserine(CDK)HMM predict
302Phosphotyrosine(Syk)HMM predict
333N-linkedHMM predict
336N-linkedHMM predict
387Phosphoserine(CK1)HMM predict
Validated transcription factor binding site by ChIP-Chip and ChIP-Seq
  • RefSeq ID: NM_004236
  • Location:chr15 47206834-47235072
  • strand:-
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
ETS1 JurkatGSE17954 47234379 47235791 1412 13
P300 T30-glioblastomaGSE21026 47234414 47235796 1382 33
No data
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
CTCF CD4GSE12889 47225449 47225770 321 0
CTCF CD4SISSRdata 47225449 47225770 321 0
H3K4me3 colorectalcancer 47233667 47234360 693 0
H3ac HepG2E 47233667 47235900 2233 0
Myc K562GSE19551 47225614 47225848 234 0
PHF8 Hs68minusFBSGSE20725 47234469 47235642 1173 0
PHF8 Hs68plusFBSGSE20725 47234110 47235884 1774 0
p130 shRbQuiescentGSE19898 47234458 47235472 1014 0
Validated miRNA targets Top
Cis-Nats regulation Top

Simple Query:


  (e.g. CHD8)

Syndromic Genes

Non-syndromic Genes

AutismKB Statistics

  • Studies: 1,036
  • Genes: 1,379
  • CNVs/SVs: 5,420
  • SNVs/Indels: 11,669
  • de novo Mutations: 5,669
  • Mosaics: 789
  • Linkage Regions: 172
  • Paper Collected: 6/30/2018
  • Last Update: 8/26/2018