AutismKB 2.0

Annotation Detail for TRIP4


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Basic Information Top
Gene Symbol:TRIP4 ( ASC-1,HsT17391 )
Gene Full Name: thyroid hormone receptor interactor 4
Band: 15q22.31
Quick LinksEntrez ID:9325; OMIM: 604501; Uniprot ID:TRIP4_HUMAN; ENSEMBL ID: ENSG00000103671; HGNC ID: 12310
Relate to Another Database: SFARIGene; denovo-db
Post Translation Modification Top
Location(AA) Modification
2N-acetylalanine.
289Phosphotyrosine.
Location(AA) Modifications Resource
289Phosphotyrosine.Swiss-Prot 53.0
289PhosphotyrosinePhospho.ELM 6.0
Location(AA) Modification Resource
41Phosphoserine(CK2)HMM predict
244Phosphothreonine(CK2)HMM predict
292Phosphoserine(CK2)HMM predict
323Phosphoserine(CK1)HMM predict
327Phosphothreonine(PKC)HMM predict
341Phosphoserine(CK1)HMM predict
347Phosphoserine(CK2)HMM predict
358N-linkedHMM predict
362N-linkedHMM predict
385Phosphotyrosine(EGFR)HMM predict
385Phosphotyrosine(Abl)HMM predict
399Phosphoserine(PKG)HMM predict
415Phosphoserine(CDK)HMM predict
477Phosphoserine(CDC2)HMM predict
530Phosphoserine(ATM)HMM predict
535Phosphoserine(ATM)HMM predict
571LysineHMM predict
574LeucineHMM predict
Validated transcription factor binding site by ChIP-Chip and ChIP-Seq
  • RefSeq ID: NM_016213
  • Location:chr15 62467072-62534552
  • strand:+
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
CTCF CD4GSE12889 62466746 62467103 357 148
CTCF CD4SISSRdata 62466746 62467103 357 148
ETS1 JurkatGSE17954 62466484 62467650 1166 6
H3K4me2 HCT116GSE10453 62465990 62466226 236 965
P300 T30-glioblastomaGSE21026 62466469 62467485 1016 96
PHF8 293TGSE20725 62466656 62467472 816 9
PHF8 Hs68minusFBSGSE20725 62466460 62467629 1169 28
PHF8 Hs68plusFBSGSE20725 62466371 62467643 1272 66
TFAP2C MCF7GSE21234 62466747 62467173 426 113
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
H3ac HepG2E 62540310 62541563 1253 6384
Myc hESGSE17917 62540513 62540997 484 6203
Oct1 H2O2-HelaGSE14283 62546011 62546038 27 11472
Oct1 HelaGSE14283 62546011 62546037 26 11472
P300 T30-glioblastomaGSE21026 62539190 62539971 781 5028
RARA MCF7GSE15244 62540760 62541715 955 6685
Rb GrowingGSE19898 62539632 62539816 184 5172
Rb QuiescentGSE19898 62539598 62539845 247 5169
Rb SenescentGSE19898 62539611 62539864 253 5185
STAT1 HeLaGSE12782 62535153 62536746 1593 1397
STAT1 HeLaGSE12783 62535153 62536712 1559 1380
TAF HelaGSE8489 62538538 62539818 1280 4626
TAF HelaGSE8489 62540518 62541290 772 6352
p130 SenescentGSE19898 62539416 62539829 413 5070
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
CTCF CD4GSE12889 62506267 62506467 200 0
CTCF CD4SISSRdata 62506267 62506467 200 0
CTCF G2GSE9613 62467012 62467190 178 0
GABP HelaGSE8489 62467041 62467501 460 0
GABP k562GSE8489 62466715 62467501 786 0
GABP k562GSE8489 62517850 62518725 875 0
KLF4 hESGSE17917 62466846 62467364 518 0
Myc K562GSE19551 62509496 62509812 316 0
NFkBII GM15510GSE19485 62466493 62467795 1302 0
Nanog ESGSE20650 62509399 62510252 853 0
Nanog hESGSE18292 62509508 62510028 520 0
Oct1 H2O2-HelaGSE14283 62516496 62516553 57 0
Oct1 HelaGSE14283 62516497 62516553 56 0
P300 T0-glioblastomaGSE21026 62509466 62510327 861 0
P300 T30-glioblastomaGSE21026 62509315 62510240 925 0
PHF8 HeLaGSE20725 62466665 62467708 1043 0
RARA MCF7GSE15244 62522307 62524136 1829 0
RUNX JurkatGSE17954 62509866 62510001 135 0
TAF HelaGSE8489 62466715 62467501 786 0
TAFII hESGSE17917 62466876 62467420 544 0
hScc1 BcellGSE12603 62467290 62467501 211 0
hScc1 BcellGSE12603 62506286 62506547 261 0
hScc1 CdLSGSE12603 62506286 62506607 321 0
p63 keratinocytesGSE17611 62491228 62492139 911 0
Validated miRNA targets Top
Cis-Nats regulation Top

Simple Query:


  (e.g. CHD8)

Syndromic Genes

Non-syndromic Genes

AutismKB Statistics

  • Studies: 1,036
  • Genes: 1,379
  • CNVs/SVs: 5,420
  • SNVs/Indels: 11,669
  • de novo Mutations: 5,669
  • Mosaics: 789
  • Linkage Regions: 172
  • Paper Collected: 6/30/2018
  • Last Update: 8/26/2018


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