AutismKB 2.0

Annotation Detail for TM9SF2


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Basic Information Top
Gene Symbol:TM9SF2 ( FLJ26287,MGC117391,P76 )
Gene Full Name: transmembrane 9 superfamily member 2
Band: 13q32.3
Quick LinksEntrez ID:9375; OMIM: 604678; Uniprot ID:TM9S2_HUMAN; ENSEMBL ID: ENSG00000125304; HGNC ID: 11865
Relate to Another Database: SFARIGene; denovo-db
Post Translation Modification Top
No data
No data
Location(AA) Modification Resource
69Phosphoserine(PKA)HMM predict
78Phosphotyrosine(Jak)HMM predict
251Phosphoserine(ATM)HMM predict
274Phosphoserine(CK2)HMM predict
289Phosphotyrosine(INSR)HMM predict
392Phosphoserine(CDC2)HMM predict
517Phosphotyrosine(Syk)HMM predict
552Phosphotyrosine(Syk)HMM predict
Validated transcription factor binding site by ChIP-Chip and ChIP-Seq
  • RefSeq ID: NM_004800
  • Location:chr13 98951728-99013277
  • strand:+
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
CTCF G2GSE9613 98948765 98949065 300 2814
CTCF G2GSE9613 98951307 98952084 777 33
Fos K562GSE19551 98946831 98947376 545 4625
GABP HelaGSE8489 98948501 98948802 301 3077
GABP HelaGSE8489 98950419 98951198 779 920
GABP k562GSE8489 98948501 98949836 1335 2560
GABP k562GSE8489 98950278 98951379 1101 900
H3K4me2 HCT116GSE10453 98949173 98949731 558 2277
H3K4me2 HCT116GSE10453 98950560 98951379 819 759
H3K4me3 colorectalcancer 98950663 98951379 716 708
H3ac HepG2E 98948988 98949836 848 2317
H3ac HepG2E 98950176 98951563 1387 859
Oct1 HelaGSE14283 98938471 98938499 28 13244
P300 T0-glioblastomaGSE21026 98934586 98935104 518 16884
P300 T30-glioblastomaGSE21026 98934357 98935227 870 16937
TAF k562GSE8489 98948501 98948687 186 3135
TAF k562GSE8489 98950207 98951465 1258 893
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
CTCF CD4GSE12889 99028901 99029152 251 15749
CTCF CD4SISSRdata 99028901 99029152 251 15749
CTCF G2GSE9613 99015738 99016059 321 2621
CTCF G2GSE9613 99022120 99022796 676 9181
CTCF G2GSE9613 99027743 99027962 219 14575
CTCF G2GSE9613 99029043 99029447 404 15968
hScc1 BcellGSE12603 99022085 99022420 335 8975
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
CTCF CD4GSE12889 98978863 98979139 276 0
CTCF CD4SISSRdata 98978863 98979139 276 0
CTCF G2GSE9613 98976260 98976480 220 0
CTCF G2GSE9613 98976975 98977194 219 0
ETS1 JurkatGSE17954 98951223 98952474 1251 0
H3ac HepG2E 98952155 98953258 1103 0
Oct1 HelaGSE14283 99008409 99008438 29 0
Validated miRNA targets Top
Cis-Nats regulation Top

Simple Query:


  (e.g. CHD8)

Syndromic Genes

Non-syndromic Genes

AutismKB Statistics

  • Studies: 1,036
  • Genes: 1,379
  • CNVs/SVs: 5,420
  • SNVs/Indels: 11,669
  • de novo Mutations: 5,669
  • Mosaics: 789
  • Linkage Regions: 172
  • Paper Collected: 6/30/2018
  • Last Update: 8/26/2018


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