AutismKB 2.0

Annotation Detail for TGFBRAP1


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Basic Information Top
Gene Symbol:TGFBRAP1 ( TRAP-1,TRAP1 )
Gene Full Name: transforming growth factor, beta receptor associated protein 1
Band: 2q12.1-q12.2
Quick LinksEntrez ID:9392; OMIM: 606237; Uniprot ID:TGFA1_HUMAN; ENSEMBL ID: ENSG00000135966; HGNC ID: 16836
Relate to Another Database: SFARIGene; denovo-db
Post Translation Modification Top
Location(AA) Modification
855Phosphoserine.
Location(AA) Modifications Resource
No data
Validated transcription factor binding site by ChIP-Chip and ChIP-Seq
  • RefSeq ID: NM_004257
  • Location:chr2 105249973-105312560
  • strand:-
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
H3ac HepG2E 105313480 105314116 636 1238
PHF8 Hs68plusFBSGSE20725 105312360 105313330 970 285
TAF k562GSE8489 105313114 105313802 688 898
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
CBP T30-glioblastomaGSE21026 105243795 105244627 832 5763
CTCF G2GSE9613 105244750 105245032 282 5083
CTCF G2GSE9613 105249605 105249825 220 259
Oct1 HelaGSE14283 105245113 105245147 34 4844
P300 T30-glioblastomaGSE21026 105243667 105244697 1030 5792
RNAII Tamoxifen-MCF7GSE14664 105245115 105245150 35 4841
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
CTCF CD4GSE12889 105270753 105270900 147 0
CTCF CD4GSE12889 105277885 105278053 168 0
CTCF CD4SISSRdata 105270753 105270900 147 0
CTCF CD4SISSRdata 105277885 105278053 168 0
CTCF JurkatGSE12889 105270708 105270900 192 0
CTCF G2GSE9613 105252355 105252543 188 0
CTCF G2GSE9613 105270596 105271370 774 0
CTCF G2GSE9613 105277226 105278173 947 0
CTCF G2GSE9613 105282214 105282465 251 0
CTCF G2GSE9613 105303785 105304020 235 0
CTCF G2GSE9613 105306068 105306302 234 0
CTCF G2GSE9613 105311773 105312317 544 0
H3K4me2 HCT116GSE10453 105311126 105312317 1191 0
H3K4me3 colorectalcancer 105311340 105312193 853 0
H3ac HepG2E 105310903 105312317 1414 0
Myc K562GSE19551 105270713 105270963 250 0
Nanog hESGSE18292 105277930 105278075 145 0
Oct1 HelaGSE14283 105261947 105261977 30 0
RNAII Tamoxifen-MCF7GSE14664 105264654 105264739 85 0
TAF k562GSE8489 105311228 105312229 1001 0
TFAP2C MCF7GSE21234 105277740 105278092 352 0
USF1 HepG2E 105310903 105312317 1414 0
hScc1 BcellGSE12603 105277767 105278100 333 0
hScc1 BcellGSE12603 105311192 105311413 221 0
Validated miRNA targets Top
Cis-Nats regulation Top

Simple Query:


  (e.g. CHD8)

Syndromic Genes

Non-syndromic Genes

AutismKB Statistics

  • Studies: 1,036
  • Genes: 1,379
  • CNVs/SVs: 5,420
  • SNVs/Indels: 11,669
  • de novo Mutations: 5,669
  • Mosaics: 789
  • Linkage Regions: 172
  • Paper Collected: 6/30/2018
  • Last Update: 8/26/2018


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