Annotation Detail for RECQL5
Basic Information Top
| Gene Symbol: | RECQL5 ( FLJ90603,RECQ5 ) |
|---|---|
| Gene Full Name: | RecQ protein-like 5 |
| Band: | 17q25 |
| Quick Links | Entrez ID:9400; OMIM: 603781; Uniprot ID:RECQ5_HUMAN; ENSEMBL ID: ENSG00000108469; HGNC ID: 9950 |
| Relate to Another Database: | SFARIGene; denovo-db |
| Location(AA) | Modification | |
|---|---|---|
| 160 | DEAH box. | |
| 815 | Phosphoserine. | |
| 839 | Phosphothreonine. | |
| Location(AA) | Modifications | Resource |
|---|
| Location(AA) | Modification | Resource |
|---|---|---|
| 19 | Phosphothreonine(PKC) | HMM predict |
| 31 | Phosphothreonine(CDC2) | HMM predict |
| 98 | Phosphoserine(PKG) | HMM predict |
| 102 | Phosphoserine(CK1) | HMM predict |
| 135 | O-linked | HMM predict |
| 192 | O-linked | HMM predict |
| 196 | Phosphothreonine(MAPK) | HMM predict |
| 436 | N-linked | HMM predict |
| 450 | Phosphoserine(CK1) | HMM predict |
| 452 | Phosphoserine(PKB) | HMM predict |
| 452 | Phosphoserine(IKK) | HMM predict |
| 478 | Phosphotyrosine(INSR) | HMM predict |
| 484 | Phosphotyrosine(INSR) | HMM predict |
| 546 | Phosphothreonine(PKC) | HMM predict |
| 562 | Phosphoserine(CK1) | HMM predict |
| 570 | Phosphothreonine(CK2) | HMM predict |
| 612 | Phosphoserine(CAMK2) | HMM predict |
| 626 | Phosphoserine(IKK) | HMM predict |
| 639 | Sulfotyrosine | HMM predict |
| 639 | Phosphotyrosine(Syk) | HMM predict |
| 639 | Phosphotyrosine(Abl) | HMM predict |
| 639 | Phosphotyrosine | HMM predict |
| 639 | Phosphotyrosine(SRC) | HMM predict |
| 713 | Methylarginine | HMM predict |
| 727 | Phosphoserine(CDC2) | HMM predict |
| 747 | Phosphoserine(PKG) | HMM predict |
| 804 | Sulfotyrosine | HMM predict |
| 815 | O-linked | HMM predict |
| 815 | Phosphoserine(CDC2) | HMM predict |
| 821 | Phosphothreonine(PKC) | HMM predict |
| 821 | O-linked | HMM predict |
| 858 | Phosphoserine(ATM) | HMM predict |
| 858 | Phosphoserine(IKK) | HMM predict |
| 865 | Phosphoserine(ATM) | HMM predict |
| 874 | O-linked | HMM predict |
| 886 | Phosphoserine(CK2) | HMM predict |
| 886 | Phosphoserine(IKK) | HMM predict |
| 896 | N-linked | HMM predict |
| 954 | Phosphoserine | HMM predict |
| 954 | Phosphoserine(CDC2) | HMM predict |
| 974 | Arginine | HMM predict |
| 979 | Serine | HMM predict |
| 987 | Cysteine | HMM predict |
- RefSeq ID: NM_001003715
- Location:chr17 71156539-71174863
- strand:-
| Transcrip Factors | Experimental Cell | Database | TF Binding Start | TF Binding End | TF Binding Length | The Distance to Gene |
|---|---|---|---|---|---|---|
| Fos | K562 | GSE19551 | 71174510 | 71175238 | 728 | 11 |
| H3ac | HepG2 | E | 71173389 | 71176422 | 3033 | 42 |
| No data |
| Transcrip Factors | Experimental Cell | Database | TF Binding Start | TF Binding End | TF Binding Length | The Distance to Gene |
|---|---|---|---|---|---|---|
| CTCF | Jurkat | GSE12889 | 71160740 | 71160930 | 190 | 0 |
| GABP | Hela | GSE8489 | 71173389 | 71175918 | 2529 | 0 |
| H3K4me3 | colorectal | cancer | 71173669 | 71174743 | 1074 | 0 |
| NFkBII | GM12878 | GSE19485 | 71171224 | 71172827 | 1603 | 0 |
| NFkBII | GM18505 | GSE19485 | 71171220 | 71172674 | 1454 | 0 |
| Nanog | ES | GSE20650 | 71160655 | 71160949 | 294 | 0 |
| Oct1 | Hela | GSE14283 | 71163376 | 71163405 | 29 | 0 |
| PHF8 | 293T | GSE20725 | 71174222 | 71175405 | 1183 | 0 |
| TAF | k562 | GSE8489 | 71173389 | 71176250 | 2861 | 0 |
| VDR | GM10855-stim | GSE22484 | 71170618 | 71173009 | 2391 | 0 |
| VDR | GM10861-stim | GSE22484 | 71170805 | 71172807 | 2002 | 0 |
| p130 | shRbQuiescent | GSE19898 | 71174410 | 71174776 | 366 | 0 |
Validated miRNA targets| Cluster ID | Plue Type | Plus Gene Name | Plus Chromosome | Plus Start | Plus End | Overlap Length | Minus Type | Minus Gene Name | Minus Chromosome | Minus Star | Minus End | Type |
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 11657 | mRNA | HCNGP | chr17 | 71174790 | 71214393 | 74 | mRNA | RECQL5 | chr17 | 71156539 | 71174864 | Sense/Antisense (SA) pairs |