Annotation Detail for LENG9

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Basic Information Top

Gene Symbol:	LENG9 ( - )
Gene Full Name:	leukocyte receptor cluster (LRC) member 9
Band:	19q13.42
Quick Links	Entrez ID:94059; OMIM: NA; Uniprot ID:LENG9_HUMAN; ENSEMBL ID: ENSG00000182909; HGNC ID: 16306
Relate to Another Database:	SFARIGene; denovo-db

Pathways, Diseases and Drugs

TF binding site

Post Translation Modification

PTM Sites from Uniprot:0 results
Experimental PTM Sites from dbPTM:0 results
Predicted PTM Sites by profile HMM from dbPTM:5 results

No data

Location(AA)	Modification	Resource
289	Phosphoserine(PKG)	HMM predict
394	Phosphoserine	HMM predict
447	Phosphoserine(ATM)	HMM predict
462	Arginine	HMM predict
466	Threonine	HMM predict

Validated transcription factor binding site by ChIP-Chip and ChIP-Seq

RefSeq ID: NM_198988
Location:chr19 59664792-59666705
strand:-

Upstream the gene:6 results
Downstream the gene:0 results
Inside the gene:8 results

Transcrip Factors	Experimental Cell	Database	TF Binding Start	TF Binding End	TF Binding Length	The Distance to Gene
FOXA1	MCF7	GSE15244	59666747	59667487	740	412
H3ac	HepG2	E	59666821	59667413	592	412
PHF8	Hs68plusFBS	GSE20725	59665758	59667720	1962	34
USF2	HepG2	E	59666821	59667413	592	412
p130	Senescent	GSE19898	59666941	59667129	188	330
p130	shRbSenescent	GSE19898	59667008	59667308	300	453

Transcrip Factors	Experimental Cell	Database	TF Binding Start	TF Binding End	TF Binding Length	The Distance to Gene
CTCF	G2	GSE9613	59665576	59666503	927	0
PHF8	HeLa	GSE20725	59664745	59667268	2523	0
VDR	GM10861-Unstim	GSE22484	59663972	59668288	4316	0
hScc1	Bcell	GSE12603	59665732	59666713	981	0
p130	Quiescent	GSE19898	59665046	59665264	218	0
p130	Quiescent	GSE19898	59665874	59666090	216	0
p130	shRbQuiescent	GSE19898	59665059	59665561	502	0
p130	shRbSenescent	GSE19898	59666513	59666874	361	0

Validated miRNA targets

Cis-Nats regulation

Cluster ID	Plue Type	Plus Gene Name	Plus Chromosome	Plus Start	Plus End	Overlap Length	Minus Type	Minus Gene Name	Minus Chromosome	Minus Star	Minus End	Type
13624	mRNA	LENG8	chr19	59652211	59665008	216	mRNA	LENG9	chr19	59664792	59666706	Sense/Antisense (SA) pairs

Simple Query:

Syndromic Genes

Non-syndromic Genes

AutismKB Statistics

Studies: 1,036
Genes: 1,379
CNVs/SVs: 5,420
SNVs/Indels: 11,669
de novo Mutations: 5,669
Mosaics: 789
Linkage Regions: 172

Paper Collected: 6/30/2018

Last Update: 8/26/2018

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