AutismKB 2.0

Annotation Detail for SYTL4


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Basic Information Top
Gene Symbol:SYTL4 ( DKFZp451P0116,FLJ40960,SLP4 )
Gene Full Name: synaptotagmin-like 4
Band: Xq22.1
Quick LinksEntrez ID:94121; OMIM: 300723; Uniprot ID:SYTL4_HUMAN; ENSEMBL ID: ENSG00000102362; HGNC ID: 15588
Relate to Another Database: SFARIGene; denovo-db
Post Translation Modification Top
Location(AA) Modification
74Phosphoserine.
201Phosphoserine.
204Phosphoserine.
217Phosphoserine.
289Phosphoserine.
488Phosphoserine.
Location(AA) Modifications Resource
289Phosphoserine.Swiss-Prot 53.0
Location(AA) Modification Resource
11Phosphoserine(CK2)HMM predict
74Phosphoserine(CDC2)HMM predict
97N-linkedHMM predict
151Phosphothreonine(PKC)HMM predict
199Phosphoserine(CK2)HMM predict
211Phosphoserine(CK1)HMM predict
217Phosphoserine(CAMK2)HMM predict
217Phosphoserine(PKG)HMM predict
217Phosphoserine(IKK)HMM predict
235Phosphoserine(IKK)HMM predict
235Phosphoserine(ATM)HMM predict
262Phosphothreonine(PKC)HMM predict
296Phosphoserine(PKA)HMM predict
296PhosphoserineHMM predict
331Phosphoserine(IKK)HMM predict
331O-linkedHMM predict
396Phosphotyrosine(Jak)HMM predict
413Phosphothreonine(PKA)HMM predict
414Phosphoserine(PKG)HMM predict
485O-linkedHMM predict
485Phosphoserine(PKG)HMM predict
511Phosphothreonine(CDK)HMM predict
511Phosphothreonine(CDC2)HMM predict
520Phosphoserine(PKG)HMM predict
537N-linkedHMM predict
567Phosphothreonine(PKA)HMM predict
579N-linkedHMM predict
585N-linkedHMM predict
Validated transcription factor binding site by ChIP-Chip and ChIP-Seq
  • RefSeq ID: NM_080737
  • Location:chrX 99816146-99873153
  • strand:-
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
CTCF G2GSE9613 99872856 99873740 884 145
ER MCF7GSE19013 99887013 99888102 1089 14404
FOXA1 MCF7GSE15244 99892556 99892975 419 19612
Fos K562GSE19551 99889717 99890232 515 16821
Oct1 HelaGSE14283 99885708 99885740 32 12571
TFAP2C MCF7GSE21234 99887316 99888333 1017 14671
TFAP2C MCF7GSE21234 99892539 99892937 398 19585
hScc1 G2GSE9613 99872931 99873810 879 217
No data
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
CTCF CD4GSE12889 99827380 99827694 314 0
CTCF CD4SISSRdata 99827380 99827694 314 0
CTCF G2GSE9613 99817718 99817960 242 0
CTCF G2GSE9613 99827005 99827745 740 0
ER E2-MCF7GSE14664 99816218 99816262 44 0
ER Fulvestrant-MCF7GSE14664 99816220 99816261 41 0
Oct1 H2O2-HelaGSE14283 99853178 99853208 30 0
Oct1 H2O2-HelaGSE14283 99864616 99864648 32 0
Oct1 HelaGSE14283 99816227 99816283 56 0
Oct1 HelaGSE14283 99816787 99816834 47 0
Oct1 HelaGSE14283 99825833 99825873 40 0
Oct1 HelaGSE14283 99832784 99832822 38 0
Oct1 HelaGSE14283 99864616 99864657 41 0
RARA MCF7GSE15244 99827041 99827993 952 0
RNAII Tamoxifen-MCF7GSE14664 99819655 99819692 37 0
hScc1 BcellGSE12603 99827285 99827709 424 0
hScc1 CdLSGSE12603 99827181 99827887 706 0
hScc1 G2GSE9613 99826933 99827923 990 0
Validated miRNA targets Top
Cis-Nats regulation Top
Cluster ID Plue Type Plus Gene Name Plus Chromosome Plus Start Plus End Overlap Length Minus Type Minus Gene Name Minus Chromosome Minus Star Minus End Type
27916 mRNA chrX 99735269 99736927 1294 mRNA SYTL4 chrX 99735633 99792643Sense/Antisense (SA) pairs

Simple Query:


  (e.g. CHD8)

Syndromic Genes

Non-syndromic Genes

AutismKB Statistics

  • Studies: 1,036
  • Genes: 1,379
  • CNVs/SVs: 5,420
  • SNVs/Indels: 11,669
  • de novo Mutations: 5,669
  • Mosaics: 789
  • Linkage Regions: 172
  • Paper Collected: 6/30/2018
  • Last Update: 8/26/2018


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