AutismKB 2.0

Annotation Detail for TNFRSF8


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Basic Information Top
Gene Symbol:TNFRSF8 ( CD30,D1S166E,Ki-1 )
Gene Full Name: tumor necrosis factor receptor superfamily, member 8
Band: 1p36.22
Quick LinksEntrez ID:943; OMIM: 153243; Uniprot ID:TNR8_HUMAN; ENSEMBL ID: ENSG00000120949; HGNC ID: 11923
Relate to Another Database: SFARIGene; denovo-db
Post Translation Modification Top
Location(AA) Modification
101N-linked (GlcNAc...) (Potential).
276N-linked (GlcNAc...) (Potential).
452Phosphoserine.
Location(AA) Modifications Resource
101N-linked (GlcNAc...) (Potential).Swiss-Prot 53.0
276N-linked (GlcNAc...) (Potential).Swiss-Prot 53.0
Location(AA) Modification Resource
32N-linkedHMM predict
37Phosphotyrosine(Syk)HMM predict
74Phosphotyrosine(Jak)HMM predict
74Phosphotyrosine(Syk)HMM predict
101N-linkedHMM predict
153O-linkedHMM predict
153Phosphoserine(MAPK)HMM predict
157O-linkedHMM predict
162Phosphoserine(IKK)HMM predict
171O-linkedHMM predict
180Phosphothreonine(CDK)HMM predict
183O-linkedHMM predict
183Phosphoserine(CDC2)HMM predict
183Phosphoserine(IKK)HMM predict
187O-linkedHMM predict
187O-linkedHMM predict
188Phosphoserine(IKK)HMM predict
190O-linkedHMM predict
214Phosphoserine(IKK)HMM predict
214Phosphoserine(CDC2)HMM predict
217O-linkedHMM predict
228Phosphoserine(CDC2)HMM predict
228O-linkedHMM predict
249Phosphotyrosine(Jak)HMM predict
249Phosphotyrosine(Syk)HMM predict
276N-linkedHMM predict
296Phosphoserine(IKK)HMM predict
336N-linkedHMM predict
338Phosphothreonine(CDC2)HMM predict
341N-linkedHMM predict
347Phosphoserine(IKK)HMM predict
347O-linkedHMM predict
349Phosphoserine(IKK)HMM predict
349Phosphoserine(CDK)HMM predict
349Phosphoserine(CDC2)HMM predict
407S-palmitoylHMM predict
444Phosphoserine(PKB)HMM predict
452Phosphoserine(IKK)HMM predict
496Phosphoserine(CDC2)HMM predict
560SulfotyrosineHMM predict
Validated transcription factor binding site by ChIP-Chip and ChIP-Seq
  • RefSeq ID: NM_001243
  • Location:chr1 12046020-12126848
  • strand:+
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
Fos K562GSE19551 12034537 12035032 495 11236
H3K27me3 colorectalcancer 12045556 12046054 498 216
NFkBII GM12878GSE19485 12041632 12043126 1494 3642
Nanog hESGSE18292 12032337 12032838 501 13433
TFAP2C MCF7GSE21234 12042514 12042866 352 3331
hScc1 BcellGSE12603 12038505 12038681 176 7428
p130 SenescentGSE19898 12045693 12046029 336 160
p130 shRbSenescentGSE19898 12045702 12046139 437 100
No data
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
CBP T30-glioblastomaGSE21026 12079877 12080391 514 0
CTCF CD4GSE12889 12101240 12101504 264 0
CTCF CD4GSE12889 12107405 12107851 446 0
CTCF CD4SISSRdata 12101240 12101504 264 0
CTCF CD4SISSRdata 12107405 12107851 446 0
CTCF JurkatGSE12889 12107527 12107758 231 0
CTCF G2GSE9613 12046016 12046321 305 0
CTCF G2GSE9613 12062070 12062300 230 0
CTCF G2GSE9613 12092089 12092365 276 0
Fos K562GSE19551 12078455 12079134 679 0
GABP k562GSE8489 12064112 12064881 769 0
Myc K562GSE19551 12101219 12101593 374 0
Myc K562GSE19551 12107383 12107849 466 0
NFkBII GM10847GSE19485 12061041 12062747 1706 0
NFkBII GM12878GSE19485 12049314 12051698 2384 0
NFkBII GM12878GSE19485 12061072 12062774 1702 0
NFkBII GM12892GSE19485 12049436 12051688 2252 0
NFkBII GM12892GSE19485 12060803 12062750 1947 0
NFkBII GM18505GSE19485 12061086 12062649 1563 0
NFkBII GM18526GSE19485 12060903 12062726 1823 0
Nanog hESGSE18292 12050321 12050776 455 0
Oct1 H2O2-HelaGSE14283 12071829 12071866 37 0
Oct1 HelaGSE14283 12071829 12071866 37 0
Oct4 hESGSE21916 12061088 12061922 834 0
P300 T30-glioblastomaGSE21026 12058158 12058929 771 0
P300 T30-glioblastomaGSE21026 12095192 12096086 894 0
SRF GMOGSE8489 12088790 12089257 467 0
SRF HepG2GSE8489 12088790 12089257 467 0
TAF HelaGSE8489 12068869 12069056 187 0
TAF k562GSE8489 12046697 12047600 903 0
TAFII hESGSE17917 12101340 12101534 194 0
TAFII hESGSE17917 12107547 12107787 240 0
hScc1 BcellGSE12603 12046054 12046369 315 0
hScc1 BcellGSE12603 12061893 12062545 652 0
hScc1 BcellGSE12603 12095339 12095619 280 0
hScc1 BcellGSE12603 12101810 12102062 252 0
hScc1 BcellGSE12603 12107580 12108912 1332 0
hScc1 CdLSGSE12603 12050880 12051355 475 0
hScc1 CdLSGSE12603 12061639 12062545 906 0
hScc1 CdLSGSE12603 12107580 12108158 578 0
Validated miRNA targets Top
Cis-Nats regulation Top

Simple Query:


  (e.g. CHD8)

Syndromic Genes

Non-syndromic Genes

AutismKB Statistics

  • Studies: 1,036
  • Genes: 1,379
  • CNVs/SVs: 5,420
  • SNVs/Indels: 11,669
  • de novo Mutations: 5,669
  • Mosaics: 789
  • Linkage Regions: 172
  • Paper Collected: 6/30/2018
  • Last Update: 8/26/2018


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