AutismKB 2.0

Annotation Detail for CHST2


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Basic Information Top
Gene Symbol:CHST2 ( C6ST,GST-2,GST2,Gn6ST-1 )
Gene Full Name: carbohydrate (N-acetylglucosamine-6-O) sulfotransferase 2
Band: 3q24
Quick LinksEntrez ID:9435; OMIM: 603798; Uniprot ID:CHST2_HUMAN; ENSEMBL ID: ENSG00000175040; HGNC ID: 1970
Relate to Another Database: SFARIGene; denovo-db
Post Translation Modification Top
Location(AA) Modification
152N-linked (GlcNAc...) (Potential).
243N-linked (GlcNAc...) (Potential).
457N-linked (GlcNAc...) (Potential).
475N-linked (GlcNAc...) (Potential).
Location(AA) Modifications Resource
152N-linked (GlcNAc...) (Potential).Swiss-Prot 53.0
243N-linked (GlcNAc...) (Potential).Swiss-Prot 53.0
457N-linked (GlcNAc...) (Potential).Swiss-Prot 53.0
475N-linked (GlcNAc...) (Potential).Swiss-Prot 53.0
Location(AA) Modification Resource
44Phosphoserine(CDC2)HMM predict
152N-linkedHMM predict
155MethylarginineHMM predict
235Phosphoserine(IKK)HMM predict
243N-linkedHMM predict
261Phosphoserine(CDC2)HMM predict
264S-palmitoylHMM predict
300Phosphothreonine(PKC)HMM predict
435Phosphothreonine(PKC)HMM predict
448Phosphoserine(MAPK)HMM predict
457N-linkedHMM predict
462Phosphoserine(IKK)HMM predict
462Phosphoserine(CK2)HMM predict
464Phosphoserine(CDC2)HMM predict
475N-linkedHMM predict
481N-linkedHMM predict
500Phosphotyrosine(SRC)HMM predict
513SerineHMM predict
530LeucineHMM predict
Validated transcription factor binding site by ChIP-Chip and ChIP-Seq
  • RefSeq ID: NM_004267
  • Location:chr3 144321357-144324499
  • strand:+
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
H3K27me3 colorectalcancer 144319912 144320502 590 1151
NFkBII GM12878GSE19485 144304688 144305996 1308 16016
Oct1 H2O2-HelaGSE14283 144304344 144304375 31 16998
Oct1 HelaGSE14283 144304334 144304375 41 17003
Oct1 HelaGSE14283 144320759 144320799 40 579
SRF GMOGSE8489 144303524 144303875 351 17658
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
FOXA1 MCF7GSE15244 144326494 144326900 406 2198
Oct1 HelaGSE14283 144328196 144328253 57 3725
P300 T30-glioblastomaGSE21026 144336620 144337199 579 12410
p130 SenescentGSE19898 144336734 144337232 498 12484
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
CTCF G2GSE9613 144321426 144322456 1030 0
CTCF G2GSE9613 144322832 144323776 944 0
Oct1 HelaGSE14283 144322764 144322792 28 0
hScc1 BcellGSE12603 144321038 144323661 2623 0
hScc1 CdLSGSE12603 144320927 144323661 2734 0
hScc1 G2GSE9613 144321002 144322456 1454 0
hScc1 G2GSE9613 144322832 144323626 794 0
Validated miRNA targets Top
Cis-Nats regulation Top

Simple Query:


  (e.g. CHD8)

Syndromic Genes

Non-syndromic Genes

AutismKB Statistics

  • Studies: 1,036
  • Genes: 1,379
  • CNVs/SVs: 5,420
  • SNVs/Indels: 11,669
  • de novo Mutations: 5,669
  • Mosaics: 789
  • Linkage Regions: 172
  • Paper Collected: 6/30/2018
  • Last Update: 8/26/2018