Annotation Detail for TNFSF8
Basic Information Top
| Gene Symbol: | TNFSF8 ( CD153,CD30L,CD30LG,MGC138144 ) |
|---|---|
| Gene Full Name: | tumor necrosis factor (ligand) superfamily, member 8 |
| Band: | 9q32-q33.1 |
| Quick Links | Entrez ID:944; OMIM: 603875; Uniprot ID:TNFL8_HUMAN; ENSEMBL ID: ENSG00000106952; HGNC ID: 11938 |
| Relate to Another Database: | SFARIGene; denovo-db |
| Location(AA) | Modification | |
|---|---|---|
| 81 | N-linked (GlcNAc...) (Potential). | |
| 109 | N-linked (GlcNAc...) (Potential). | |
| 153 | N-linked (GlcNAc...) (Potential). | |
| 189 | N-linked (GlcNAc...) (Potential). | |
| 201 | N-linked (GlcNAc...) (Potential). | |
| Location(AA) | Modifications | Resource |
|---|---|---|
| 81 | N-linked (GlcNAc...) (Potential). | Swiss-Prot 53.0 |
| 109 | N-linked (GlcNAc...) (Potential). | Swiss-Prot 53.0 |
| 153 | N-linked (GlcNAc...) (Potential). | Swiss-Prot 53.0 |
| 189 | N-linked (GlcNAc...) (Potential). | Swiss-Prot 53.0 |
| 201 | N-linked (GlcNAc...) (Potential). | Swiss-Prot 53.0 |
| Location(AA) | Modification | Resource |
|---|---|---|
| 67 | Phosphoserine(IKK) | HMM predict |
| 67 | Phosphoserine | HMM predict |
| 71 | Phosphoserine(CDC2) | HMM predict |
| 109 | N-linked | HMM predict |
| 201 | N-linked | HMM predict |
| 207 | N-linked | HMM predict |
| 213 | Sulfotyrosine | HMM predict |
- RefSeq ID: NM_001244
- Location:chr9 116704944-116732590
- strand:-
| No data |
| Transcrip Factors | Experimental Cell | Database | TF Binding Start | TF Binding End | TF Binding Length | The Distance to Gene |
|---|---|---|---|---|---|---|
| CBP | T30-glioblastoma | GSE21026 | 116686773 | 116687526 | 753 | 17795 |
| CBP | T30-glioblastoma | GSE21026 | 116696246 | 116697586 | 1340 | 8029 |
| Nanog | ES | GSE20650 | 116690757 | 116691141 | 384 | 13996 |
| P300 | T0-glioblastoma | GSE21026 | 116686755 | 116687218 | 463 | 17958 |
| P300 | T30-glioblastoma | GSE21026 | 116686820 | 116687537 | 717 | 17766 |
| P300 | T30-glioblastoma | GSE21026 | 116696095 | 116697671 | 1576 | 8062 |
| TFAP2C | MCF7 | GSE21234 | 116692111 | 116692431 | 320 | 12674 |
| Transcrip Factors | Experimental Cell | Database | TF Binding Start | TF Binding End | TF Binding Length | The Distance to Gene |
|---|---|---|---|---|---|---|
| CTCF | CD4 | GSE12889 | 116709048 | 116709410 | 362 | 0 |
| CTCF | CD4 | SISSRdata | 116709048 | 116709410 | 362 | 0 |
| FOXA1 | MCF7 | GSE15244 | 116710044 | 116711375 | 1331 | 0 |
| FoxA1 | MCF7 | MACSdata | 116710023 | 116710696 | 673 | 0 |
| Nanog | hES | GSE18292 | 116727861 | 116728094 | 233 | 0 |
| Oct1 | H2O2-Hela | GSE14283 | 116712016 | 116712043 | 27 | 0 |
| Oct1 | Hela | GSE14283 | 116712014 | 116712044 | 30 | 0 |
| P300 | T30-glioblastoma | GSE21026 | 116709971 | 116711224 | 1253 | 0 |
| RARA | MCF7 | GSE15244 | 116710044 | 116712009 | 1965 | 0 |
| Rb | shRbQuiescent | GSE19898 | 116719892 | 116720130 | 238 | 0 |
| TFAP2C | MCF7 | GSE21234 | 116709974 | 116710776 | 802 | 0 |
| hScc1 | Bcell | GSE12603 | 116708874 | 116709696 | 822 | 0 |
Validated miRNA targets