AutismKB 2.0

Annotation Detail for GGPS1


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Basic Information Top
Gene Symbol:GGPS1 ( GGPPS,GGPPS1 )
Gene Full Name: geranylgeranyl diphosphate synthase 1
Band: 1q42.3
Quick LinksEntrez ID:9453; OMIM: 606982; Uniprot ID:GGPPS_HUMAN; ENSEMBL ID: ENSG00000152904; HGNC ID: 4249
Relate to Another Database: SFARIGene; denovo-db
Post Translation Modification Top
Location(AA) Modification
25N6-acetyllysine.
Location(AA) Modifications Resource
Location(AA) Modification Resource
105Phosphothreonine(PKC)HMM predict
135N-linkedHMM predict
144Phosphotyrosine(INSR)HMM predict
144Phosphotyrosine(SRC)HMM predict
144Phosphotyrosine(Syk)HMM predict
169Phosphotyrosine(Syk)HMM predict
199Phosphoserine(CK1)HMM predict
201N-linkedHMM predict
203Phosphoserine(IKK)HMM predict
Validated transcription factor binding site by ChIP-Chip and ChIP-Seq
  • RefSeq ID: NM_001037277
  • Location:chr1 233558375-233574464
  • strand:+
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
PHF8 HeLaGSE20725 233557048 233559646 2598 29
No data
No data
Validated miRNA targets Top
Cis-Nats regulation Top

Simple Query:


  (e.g. CHD8)

Syndromic Genes

Non-syndromic Genes

AutismKB Statistics

  • Studies: 1,036
  • Genes: 1,379
  • CNVs/SVs: 5,420
  • SNVs/Indels: 11,669
  • de novo Mutations: 5,669
  • Mosaics: 789
  • Linkage Regions: 172
  • Paper Collected: 6/30/2018
  • Last Update: 8/26/2018