Annotation Detail for CABP1
Basic Information Top
| Gene Symbol: | CABP1 ( CALBRAIN,HCALB_BR ) |
|---|---|
| Gene Full Name: | calcium binding protein 1 |
| Band: | 12q24.31 |
| Quick Links | Entrez ID:9478; OMIM: 605563; Uniprot ID:CABP1_HUMAN; ENSEMBL ID: ENSG00000157782; HGNC ID: 1384 |
| Relate to Another Database: | SFARIGene; denovo-db |
| Location(AA) | Modification | |
|---|---|---|
| 323 | Phosphoserine. | |
| Location(AA) | Modifications | Resource |
|---|---|---|
| 2 | N-myristoyl glycine. | Swiss-Prot 53.0 |
| Location(AA) | Modification | Resource |
|---|---|---|
| 24 | Phosphotyrosine(INSR) | HMM predict |
| 24 | Phosphotyrosine(SRC) | HMM predict |
| 24 | Phosphotyrosine(Syk) | HMM predict |
| 62 | S-palmitoyl | HMM predict |
| 101 | Phosphotyrosine(INSR) | HMM predict |
| 101 | Phosphotyrosine(Jak) | HMM predict |
| 127 | Phosphoserine(ATM) | HMM predict |
| 181 | Phosphothreonine(CK2) | HMM predict |
| 225 | Methionine | HMM predict |
- RefSeq ID: NM_001033677
- Location:chr12 119562804-119589507
- strand:+
| Transcrip Factors | Experimental Cell | Database | TF Binding Start | TF Binding End | TF Binding Length | The Distance to Gene |
|---|---|---|---|---|---|---|
| CTCF | CD4 | GSE12889 | 119547907 | 119548034 | 127 | 14834 |
| CTCF | CD4 | SISSRdata | 119547907 | 119548034 | 127 | 14834 |
| CTCF | G2 | GSE9613 | 119544162 | 119544547 | 385 | 18450 |
| CTCF | G2 | GSE9613 | 119561745 | 119561907 | 162 | 979 |
| GATA3 | MCF7 | GSE15244 | 119552434 | 119553545 | 1111 | 9815 |
| NRSF | pAb | Jurkat | 119562581 | 119562881 | 300 | 74 |
| Oct1 | H2O2-Hela | GSE14283 | 119552405 | 119552432 | 27 | 10386 |
| RARA | MCF7 | GSE15244 | 119552584 | 119553218 | 634 | 9904 |
| hScc1 | Bcell | GSE12603 | 119545155 | 119545312 | 157 | 17571 |
| No data |
| Transcrip Factors | Experimental Cell | Database | TF Binding Start | TF Binding End | TF Binding Length | The Distance to Gene |
|---|---|---|---|---|---|---|
| CTCF | G2 | GSE9613 | 119562244 | 119563754 | 1510 | 0 |
| CTCF | G2 | GSE9613 | 119564677 | 119564973 | 296 | 0 |
| CTCF | G2 | GSE9613 | 119569014 | 119569368 | 354 | 0 |
| CTCF | G2 | GSE9613 | 119571121 | 119572738 | 1617 | 0 |
| GATA3 | MCF7 | GSE15244 | 119570471 | 119570648 | 177 | 0 |
| H3K27me3 | colorectal | cancer | 119564203 | 119564677 | 474 | 0 |
| NRSF | Jurkat | GSE13047 | 119563104 | 119564569 | 1465 | 0 |
| NRSF | mAb | Jurkat | 119563634 | 119565486 | 1852 | 0 |
| NRSF-mono | Jurkat | QuESTdata | 119563096 | 119564255 | 1159 | 0 |
| NRSF | pAb | Jurkat | 119563344 | 119565234 | 1890 | 0 |
| NRSF | pAb | Jurkat | 119567292 | 119567481 | 189 | 0 |
| NRSF-poly | Jurkat | QuESTdata | 119563000 | 119564761 | 1761 | 0 |
| TFAP2C | MCF7 | GSE21234 | 119563583 | 119564063 | 480 | 0 |
| hScc1 | Bcell | GSE12603 | 119562512 | 119563790 | 1278 | 0 |
| hScc1 | Bcell | GSE12603 | 119569014 | 119569368 | 354 | 0 |
| hScc1 | CdLS | GSE12603 | 119562209 | 119563952 | 1743 | 0 |
| hScc1 | CdLS | GSE12603 | 119569014 | 119569368 | 354 | 0 |
| hScc1 | CdLS | GSE12603 | 119571121 | 119571720 | 599 | 0 |
| hScc1 | G2 | GSE9613 | 119562473 | 119564021 | 1548 | 0 |
| hScc1 | G2 | GSE9613 | 119569014 | 119569368 | 354 | 0 |
Validated miRNA targets| Cluster ID | Plue Type | Plus Gene Name | Plus Chromosome | Plus Start | Plus End | Overlap Length | Minus Type | Minus Gene Name | Minus Chromosome | Minus Star | Minus End | Type |
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 6707 | mRNA | CABP1 | chr12 | 119541141 | 119567845 | 973 | EST | chr12 | 119530686 | 119542114 | Non-exonic Bidirectional (NOB) pairs | |