Annotation Detail for CHST10
Basic Information Top
| Gene Symbol: | CHST10 ( HNK-1ST,HNK1ST,MGC17148 ) |
|---|---|
| Gene Full Name: | carbohydrate sulfotransferase 10 |
| Band: | 2q11.2 |
| Quick Links | Entrez ID:9486; OMIM: 606376; Uniprot ID:CHSTA_HUMAN; ENSEMBL ID: ENSG00000115526; HGNC ID: 19650 |
| Relate to Another Database: | SFARIGene; denovo-db |
| Location(AA) | Modification | |
|---|---|---|
| 99 | N-linked (GlcNAc...) (Potential). | |
| 228 | N-linked (GlcNAc...) (Potential). | |
| 316 | N-linked (GlcNAc...) (Potential). | |
| Location(AA) | Modifications | Resource |
|---|---|---|
| 99 | N-linked (GlcNAc...) (Potential). | Swiss-Prot 53.0 |
| 228 | N-linked (GlcNAc...) (Potential). | Swiss-Prot 53.0 |
| 316 | N-linked (GlcNAc...) (Potential). | Swiss-Prot 53.0 |
| Location(AA) | Modification | Resource |
|---|---|---|
| 73 | Phosphoserine(ATM) | HMM predict |
| 99 | N-linked | HMM predict |
| 103 | Phosphothreonine(CDK) | HMM predict |
| 103 | Phosphothreonine(CDC2) | HMM predict |
| 169 | Phosphoserine(PKB) | HMM predict |
| 171 | Phosphoserine(CK2) | HMM predict |
| 228 | N-linked | HMM predict |
| 316 | N-linked | HMM predict |
| 339 | Phenylalanine | HMM predict |
| 341 | Phenylalanine | HMM predict |
- RefSeq ID: NM_004854
- Location:chr2 100374753-100400522
- strand:-
| Transcrip Factors | Experimental Cell | Database | TF Binding Start | TF Binding End | TF Binding Length | The Distance to Gene |
|---|---|---|---|---|---|---|
| CTCF | CD4 | GSE12889 | 100410673 | 100410814 | 141 | 10221 |
| CTCF | CD4 | SISSRdata | 100410673 | 100410814 | 141 | 10221 |
| CTCF | G2 | GSE9613 | 100407444 | 100407772 | 328 | 7086 |
| CTCF | G2 | GSE9613 | 100409269 | 100409581 | 312 | 8903 |
| CTCF | G2 | GSE9613 | 100410480 | 100411158 | 678 | 10297 |
| H3K27me3 | colorectal | cancer | 100401241 | 100401560 | 319 | 878 |
| hScc1 | Bcell | GSE12603 | 100409269 | 100409545 | 276 | 8885 |
| hScc1 | Bcell | GSE12603 | 100410516 | 100410905 | 389 | 10188 |
| hScc1 | G2 | GSE9613 | 100410125 | 100411158 | 1033 | 10119 |
| Transcrip Factors | Experimental Cell | Database | TF Binding Start | TF Binding End | TF Binding Length | The Distance to Gene |
|---|---|---|---|---|---|---|
| CTCF | CD4 | GSE12889 | 100364131 | 100364461 | 330 | 10458 |
| CTCF | CD4 | SISSRdata | 100364131 | 100364461 | 330 | 10458 |
| CTCF | Hela | GSE12889 | 100364172 | 100364357 | 185 | 10489 |
| CTCF | G2 | GSE9613 | 100363786 | 100364413 | 627 | 10654 |
| Nanog | hES | GSE18292 | 100364156 | 100364319 | 163 | 10516 |
| Oct4 | hES | GSE17917 | 100364149 | 100364373 | 224 | 10493 |
| Sox2 | hES | GSE18292 | 100364158 | 100364396 | 238 | 10477 |
| TFAP2C | MCF7 | GSE21234 | 100359593 | 100360138 | 545 | 14888 |
| hScc1 | Bcell | GSE12603 | 100363964 | 100364305 | 341 | 10619 |
| hScc1 | CdLS | GSE12603 | 100363672 | 100364449 | 777 | 10693 |
| hScc1 | G2 | GSE9613 | 100363672 | 100364483 | 811 | 10676 |
| Transcrip Factors | Experimental Cell | Database | TF Binding Start | TF Binding End | TF Binding Length | The Distance to Gene |
|---|---|---|---|---|---|---|
| CTCF | G2 | GSE9613 | 100374868 | 100375438 | 570 | 0 |
| CTCF | G2 | GSE9613 | 100378971 | 100379112 | 141 | 0 |
| CTCF | G2 | GSE9613 | 100386632 | 100387267 | 635 | 0 |
| CTCF | G2 | GSE9613 | 100388451 | 100389013 | 562 | 0 |
| CTCF | G2 | GSE9613 | 100390044 | 100390555 | 511 | 0 |
| CTCF | G2 | GSE9613 | 100391583 | 100391929 | 346 | 0 |
| CTCF | G2 | GSE9613 | 100396947 | 100397193 | 246 | 0 |
| CTCF | G2 | GSE9613 | 100400259 | 100400688 | 429 | 0 |
| H3K27me3 | colorectal | cancer | 100399033 | 100399954 | 921 | 0 |
| H3ac | HepG2 | E | 100399380 | 100399954 | 574 | 0 |
| NFkBII | GM12878 | GSE19485 | 100376701 | 100379072 | 2371 | 0 |
| NFkBII | GM18526 | GSE19485 | 100377621 | 100379069 | 1448 | 0 |
| PHF8 | HeLa | GSE20725 | 100399720 | 100401150 | 1430 | 0 |
| hScc1 | Bcell | GSE12603 | 100400259 | 100400652 | 393 | 0 |
Validated miRNA targets