AutismKB 2.0

Annotation Detail for PIGB


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Basic Information Top
Gene Symbol:PIGB ( MGC21236 )
Gene Full Name: phosphatidylinositol glycan anchor biosynthesis, class B
Band: 15q21.3
Quick LinksEntrez ID:9488; OMIM: 604122; Uniprot ID:PIGB_HUMAN; ENSEMBL ID: ENSG00000069943; HGNC ID: 8959
Relate to Another Database: SFARIGene; denovo-db
Post Translation Modification Top
Location(AA) Modification
26N-linked (GlcNAc...) (Potential).
39Phosphoserine (By similarity).
427N-linked (GlcNAc...) (Potential).
Location(AA) Modifications Resource
26N-linked (GlcNAc...) (Potential).Swiss-Prot 53.0
427N-linked (GlcNAc...) (Potential).Swiss-Prot 53.0
Location(AA) Modification Resource
6Phosphoserine(IKK)HMM predict
26N-linkedHMM predict
39Phosphoserine(PKA)HMM predict
40Phosphothreonine(PKA)HMM predict
185C-linkedHMM predict
187S-palmitoylHMM predict
188S-palmitoylHMM predict
215Phosphoserine(IKK)HMM predict
427N-linkedHMM predict
493Phosphoserine(CK1)HMM predict
Validated transcription factor binding site by ChIP-Chip and ChIP-Seq
  • RefSeq ID: NM_004855
  • Location:chr15 53398424-53435136
  • strand:+
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
Oct1 H2O2-HelaGSE14283 53387122 53387151 29 11288
Oct1 HelaGSE14283 53387121 53387159 38 11285
PolII HeLaGSE12783 53397070 53399381 2311 199
TFAP2C MCF7GSE21234 53389692 53390263 571 8447
No data
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
ETS1 JurkatGSE17954 53398120 53399096 976 0
H3K4me3 colorectalcancer 53398225 53398877 652 0
H3ac HepG2E 53398225 53398877 652 0
P300 T0-glioblastomaGSE21026 53398207 53399189 982 0
P300 T30-glioblastomaGSE21026 53398149 53399279 1130 0
PHF8 293TGSE20725 53398100 53399095 995 0
PHF8 Hs68minusFBSGSE20725 53397917 53399035 1118 0
Rb GrowingGSE19898 53398544 53398955 411 0
Rb QuiescentGSE19898 53398603 53398746 143 0
Rb QuiescentGSE19898 53398867 53398970 103 0
TAF HelaGSE8489 53398225 53398877 652 0
hScc1 BcellGSE12603 53398513 53398877 364 0
p130 QuiescentGSE19898 53398345 53398794 449 0
p130 QuiescentGSE19898 53398854 53398969 115 0
p130 SenescentGSE19898 53398218 53398937 719 0
p130 shRbQuiescentGSE19898 53398123 53398956 833 0
p130 shRbSenescentGSE19898 53398175 53398933 758 0
Validated miRNA targets Top
Cis-Nats regulation Top
Cluster ID Plue Type Plus Gene Name Plus Chromosome Plus Start Plus End Overlap Length Minus Type Minus Gene Name Minus Chromosome Minus Star Minus End Type
8848 mRNA PIGB chr15 53398487 53435137 362 mRNA PIGB chr15 53434731 53435525Sense/Antisense (SA) pairs

Simple Query:


  (e.g. CHD8)

Syndromic Genes

Non-syndromic Genes

AutismKB Statistics

  • Studies: 1,036
  • Genes: 1,379
  • CNVs/SVs: 5,420
  • SNVs/Indels: 11,669
  • de novo Mutations: 5,669
  • Mosaics: 789
  • Linkage Regions: 172
  • Paper Collected: 6/30/2018
  • Last Update: 8/26/2018


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